Ontologies
VARIO
Variation Ontology (VARIO)
OWL
No license
Last submission date May 27, 2021
Summary
Classes
Properties
Instances
Notes
Mappings
Widgets
Sparql

General information

Variation Ontology, VariO, is an ontology for standardized, systematic description of effects, consequences and mechanisms of variations. VariO allows unambiguous description of variation effects as well as computerized analyses over databases utilizing the ontology for annotation. VariO is a position specific ontology that can be used to describe effects of variations on DNA, RNA and/or protein level, whatever is appropriate. See more...
Initial created on May 27, 2021. For additional information, contact Mauno Vihinen (mauno.vihinen@med.lu.se).

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Metrics

FAIR score
Beta

Total score : 294.0 ( 61.0%)
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Submissions

Identifiers

URI

http://purl.obolibrary.org/obo/vario.owl
http://purl.obolibrary.org/obo/vario.owl

Version IRI

http://purl.obolibrary.org/obo/vario/2017-02-06/vario.owl
http://purl.obolibrary.org/obo/vario/2017-02-06/vario.owl

AgroPortal URI

https://agroportal.lirmm.fr/ontologies/VARIO
https://agroportal.lirmm.fr/ontologies/VARIO

Dates

Creation date

May 27, 2021

Submission date

May 27, 2021

Persons and organizations

Contact

Mauno Vihinen

Endorsed by

RDA WDI

Other links

Projects and usage information

Projects using VARIO

Agrisemantics Map of Data Standards
RDA Wheat Interoperability Working Group

Known usage

VariO allows : consistent naming, annotation of variation effects, data integration, comparison of variations and datasets, statistical studies, development of sofware tools.

Methodology and provenance

The fields Knowledge representation paradigm, Engineering methodology, Created with, Accrual method, Accrual periodicity... are empty

Community

Groups

OBO Foundry
Wheat Data Interoperability working group

Content

Identifier pattern

http://purl.obolibrary.org/obo/VariO_[0-9]{4}
http://purl.obolibrary.org/obo/VariO_[0-9]{4}

Preferred namespace URI

http://purl.obolibrary.org/obo/VariO_
http://purl.obolibrary.org/obo/VariO_

Preferred namespace prefix

vario

Example of resource

http://purl.obolibrary.org/obo/VariO_0117
http://purl.obolibrary.org/obo/VariO_0117

Visits

Views of VARIO

No views available for VARIO.