Solanaceae Phenotype Ontology

Last uploaded: October 7, 2021
Details
Acronym SPTO
Visibility Public
Description Solanaceae crop phenotypes and traits, developed in collaboration with the research community, especially for breeder traits of agronomic importance.
Status Production
Format OBO
Contact Naama Menda, nm249@cornell.edu
Categories Breeding and Genetic Improvement, Plant Phenotypes and Traits
Groups Crop Ontology Curation Tool
Additional Metadata
Alternative nameSP
bug Databasehttps://github.com/solgenomics/sgn/issues
deprecatedfalse
endpoint
example IdentifierSP:0000334
has Formality Levelhttp://w3id.org/nkos/nkostype#ontology
has LicenseCreative Commons License
Ontology Syntaxhttp://purl.obolibrary.org/obo/oboformat/spec.html
has Prior Versionhttp://data.agroportal.lirmm.fr/ontologies/SPTO/submissions/2
identifierhttps://doi.org/10.1104/pp.108.119560
is Of Typehttp://omv.ontoware.org/2005/05/ontology#DomainOntology
modification Date2018-03-29T00:00:00+00:00
Natural Language
preferred Namespace Prefixsolanaceae_phenotype
Release date2021-10-07T00:00:00+00:00
repositoryhttps://github.com/solgenomics/sgn/blob/master/ontology/SP.obo
URI Lookup Endpointhttp://data.agroportal.lirmm.fr/search?ontologies=SPTO&require_exact_match=true&q=
used Ontology Engineering ToolOBO-Edit 2.3.1
Submissions
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Links
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FAIR Scores beta
Total score : 268.0 ( 56.0% ) details
Metrics
Classes 491
Individuals 0
Properties 3
Maximum depth 6
Maximum number of children 141
Average number of children 4
Classes with a single child 31
Classes with more than 25 children 1
Classes with no definition 219
Visits
includedInDataCatalog
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Projects using SPTO

Agrisemantics Map of Data Standards

Agronomy Field Information Management System

Minimum Information About a Plant Phenotyping Experiment

The Crop Ontology project