Solanaceae Phenotype Ontology

Last uploaded: September 13, 2023
Details
Acronym SPTO
Visibility Public
Description Solanaceae crop phenotypes and traits, developed in collaboration with the research community, especially for breeder traits of agronomic importance.
Status Production
Format OBO
Contact Naama Menda, nm249@cornell.edu
Categories Breeding and Genetic Improvement, Plant Phenotypes and Traits
Groups Crop Ontology Curation Tool
Additional Metadata
URIhttp://purl.obolibrary.org/obo/TEMP.owl
Alternative nameSP
bug Databasehttps://github.com/solgenomics/sgn/issues
deprecatedfalse
endpoint
example Identifierhttp://www.cropontology.org/rdf/SP:0000334
has Domainhttps://data.agroportal.lirmm.fr/categories/TRAITS, https://data.agroportal.lirmm.fr/categories/GENBREEDING
has Formality Levelhttp://w3id.org/nkos/nkostype#ontology
has LicenseCreative Commons License
Ontology Syntaxhttp://purl.obolibrary.org/obo/oboformat/spec.html
has Prior Versionhttp://data.agroportal.lirmm.fr/ontologies/SPTO/submissions/3
identifierhttps://doi.org/10.1104/pp.108.119560
is Of Typehttp://omv.ontoware.org/2005/05/ontology#DomainOntology
modification Date2018-03-29T00:00:00+00:00
Natural Language
preferred Namespace Prefixsolanaceae_phenotype
preferred Namespace Urihttps://cropontology.org/rdf/SPTO
Release date2023-09-13T19:22:03+02:00
repositoryhttps://github.com/solgenomics/sgn/blob/master/ontology/SP.obo
URI Lookup Endpointhttp://data.agroportal.lirmm.fr/search?ontologies=SPTO&require_exact_match=true&q=
used Ontology Engineering ToolOBO-Edit 2.3.1
Submissions
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Metrics
Classes 501
Individuals 0
Properties 3
Maximum depth 6
Maximum number of children 151
Average number of children 4
Classes with a single child 30
Classes with more than 25 children 1
Classes with no definition 219
Visits
includedInDataCatalog
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Projects using SPTO

Agrisemantics Map of Data Standards

Agronomy Field Information Management System

Minimum Information About a Plant Phenotyping Experiment

The Crop Ontology project