Soil Food Web Ontology

Last uploaded: March 9, 2023
Details
Acronym SFWO
Visibility Public
Description The Soil Food Web Ontology (SFWO) is a OWL ontology which provides a standardised terminology and a logical formalisation of the domain of soil trophic ecology. It proposes a reference vocabulary to describe information about trophic interactions, feeding preferences (diets) and feeding processes of soil biota. By harmonizing the definitions of trophic groups, SFWO provides a common, logically-sound framework for soil-associated consumers classification across taxonomic groups and trophic levels. The Soil Food Web Ontology aims at being a reference ontology for soil trophic ecology, and a resource for ontology-driven applications in the field, including: trophic trait datasets standardization, trophic data integration and knowledge graph construction, automated soil food web reconstruction using OWL reasoning, and trophic information extraction., The Soil Food Web Ontology (SFWO) describes concepts related to the trophic ecology of soil organisms, including feeding preferences, food resources, trophic processes, and trophic groups, across taxonomic groups and trophic levels. SFWO aims at being both a reference ontology -including a standardised vocabulary- for soil trophic ecology, and an application ontology, with a focus on reasoning-based applications.
Status Alpha
Format OWL
Contact Mickaël Hedde, mickael.hedde@inrae.fr
Nicolas Le Guillarme, nicolas.leguillarme@univ-grenoble-alpes.fr
Categories Biodiversity and Ecology
Additional Metadata
URIhttp://purl.org/sfwo.owl
bug Databasehttps://github.com/nleguillarme/soil_food_web_ontology/issues
deprecatedfalse
example Identifierhttp://purl.org/sfwo/SFWO_0000012
ContributorsIrene Calderón-Sanou, Benjamin Pey, Maria J.I. Briones, Wilfried Thuiller, Florine Degrune, Carlos A. Martínez-Muñoz, Camille Martinez Almoyna, David J. Russell, Karin Hohberg, Matty P. Berg
CreatorsNicolas Le Guillarme, Anton M. Potapov, Mickaël Hedde
has Formality Levelhttp://w3id.org/nkos/nkostype#ontology
has LicenseCreative Commons License
Ontology Syntaxhttp://purl.obolibrary.org/obo/oboformat/spec.html
has Prior Versionhttp://data.agroportal.lirmm.fr/ontologies/SFWO/submissions/4
is Of Typehttp://omv.ontoware.org/2005/05/ontology#DomainOntology
Natural Language
number Of Axioms4931
ontology Related Tohttp://data.agroportal.lirmm.fr/ontologies/ENVO, http://data.agroportal.lirmm.fr/ontologies/NCBITAXON, local:ECOCORE
preferred Namespace Prefixsfwo
Release date2023-03-09T00:00:00+00:00
repositoryhttps://github.com/nleguillarme/soil_food_web_ontology
URI Lookup Endpointhttp://data.agroportal.lirmm.fr/search?ontologies=SFWO&require_exact_match=true&q=
use GuidelinesPlease use the issue tracker to request new terms/classes or report errors or specific concerns related to the ontology : https://github.com/nleguillarme/soil_food_web_ontology/issues
used Ontology Engineering Toolhttp://protege.stanford.edu
version2023-03-09
Version IRIhttp://purl.org/sfwo/releases/2023-03-09/sfwo.owl
Submissions
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Total score : 275.0 ( 57.0% ) details
Metrics
Classes 762
Individuals 165
Properties 136
Maximum depth 32
Maximum number of children 42
Average number of children 2
Classes with a single child 171
Classes with more than 25 children 1
Classes with no definition 410
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