Ontologies
PPEO
Plant Phenotype Experiment Ontology (PPEO)
OWL
View license
Last submission date November 12, 2019
Summary
Classes
Properties
Instances
Notes
Mappings
Widgets
SPARQL

General information

The Plant Phenotyping Experiment Ontology (PPEO) is an implementation of the Minimal Information About Plant Phenotyping Experiment. It lists and organises all the informations necessary to describe and reuse a phenotyping dataset following FAIR principles (Findable Interoperable Accessible Reusable). It has been initiated with experts from Elixir, Emphasis, Bioversity International - CGIAR and RDA. See more...
Initial created on November 12, 2019. For additional information, contact Cyril Pommier (cyril.pommier@inrae.fr).

Languages

Keywords and classes

phenotypes
agronomic characters
experimentation

Categories and subjects

Gene
Obs
Pheno
Physio
Plant
C 2758
Svg Vector Icons : http://www.onlinewebfonts.com/icon
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Metrics

FAIR score
Beta

Total score : 294.0 ( 61.0%)
See details

Submissions

Identifiers

URI

http://purl.org/ppeo/PPEO.owl
http://purl.org/ppeo/PPEO.owl

AgroPortal URI

https://agroportal.lirmm.fr/ontologies/PPEO
https://agroportal.lirmm.fr/ontologies/PPEO

Dates

Creation date

November 12, 2019

Submission date

November 12, 2019

Modification date

January 8, 2018

Persons and organizations

Contact

Cyril Pommier

Creator

Ines Chaves
Marie-Angélique Laporte
Pascal Neveu
Cyril Pommier
Daniel Faria
Pierre Larmande
Bruno Vasques Costa
Hanna Cwiek-Kupczynska
Guillaume Cornut
Evangelia Papoutsoglou
Manuel Ruiz

Publisher

INRAE

Funded or sponsored by

EPPN2020
ELIXIR-EXCELERATE
FP7 project transPLANT

Endorsed by

MIAPPE

Other links

Projects and usage information

Methodology and provenance

The fields Knowledge representation paradigm, Engineering methodology, Created with, Accrual method, Accrual periodicity... are empty

Community

Repository

https://github.com/MIAPPE/MIAPPE-ontology
https://github.com/MIAPPE/MIAPPE-ontology

Bug database

https://github.com/MIAPPE/MIAPPE-ontology/issues
https://github.com/MIAPPE/MIAPPE-ontology/issues

Notes

In PPEO, MIAPPE sections are represented as classes, and MIAPPE attributes are mainly represented as data properties connected to the corresponding classes. Intermediate classes and object properties are used to capture paired or grouped attributes, as necessary. Ontology recommendations for MIAPPE fields are encoded as annotations of the properties or property restriction axioms of classes. Correspondences between MIAPPE fields and BrAPI fields are encoded as cross-references.

Groups

National research institute for agriculture, food and the environment
Wheat Data Interoperability working group

Content

Identifier pattern

http://purl.org/ppeo/PPEO.owl#.+
http://purl.org/ppeo/PPEO.owl#.+

Preferred namespace URI

http://purl.org/ppeo/PPEO.owl#
http://purl.org/ppeo/PPEO.owl#

Preferred namespace prefix

ppeo

Example of resource

https://raw.githubusercontent.com/MIAPPE/MIAPPE-ontology/master/MIAPPE.owl#MIAPPE_000011
https://raw.githubusercontent.com/MIAPPE/MIAPPE-ontology/master/MIAPPE.owl#MIAPPE_000011

Metadata vocabulary used

dc

Visits

Views of PPEO

No views available for PPEO.