Acronym | PO |
Visibility | Public |
Description | The Plant Ontology is a structured vocabulary and database resource that links plant anatomy, morphology and growth and development to plant genomics data., An ontology that describes plant anatomy, morphology, and growth and development in plants. |
Status | Production |
Format | OWL |
Contact | Laurel Cooper, cooperl@science.oregonstate.edu Pankaj Jaiswal, jaiswalp@science.oregonstate.edu |
Categories | Biodiversity and Ecology, Plant Anatomy and Development, Plant Genetic Resources, Plant Science and Plant Products |
Groups | Consortium of Agricultural Biological Databases, OBO Foundry, Rice Data Interoperability working group, Wheat Data Interoperability working group |
URI | http://purl.obolibrary.org/obo/po.owl |
abstract | A non extensive collection of terms that describe structure and developmental stages of a plant. Arranged in a structured order/network based on the biological concept describing the term's relationship in an ontology tree. |
bug Database | https://github.com/Planteome/plant-ontology/issues |
From the same domain than | EO, TO, TAXREF-LD, C3POPLANT |
deprecated | false |
endorsed By | RDA WDI (http://ist.blogs.inra.fr/wdi/) |
endpoint | ![]() |
example Identifier | http://purl.obolibrary.org/obo/NCBITaxon_33090 |
has Domain | https://data.agroportal.lirmm.fr/categories/PLANTDEV, https://data.agroportal.lirmm.fr/categories/BIODIV, https://data.agroportal.lirmm.fr/categories/PLANT |
has Formality Level | http://w3id.org/nkos/nkostype#ontology |
has License | ![]() |
Ontology Syntax | http://www.w3.org/ns/formats/RDF_XML |
has Prior Version | PO/submissions/16 |
identifier | |
is Format Of | http://purl.obolibrary.org/obo/po.obo |
is Of Type | http://omv.ontoware.org/2005/05/ontology#DomainOntology |
known Usage | Used to annotate phenotypes and patterns of gene expression |
Natural Language | |
ontology Related To | CL, http://bioportal.bioontology.org/ontologies/CHEBI, EO, PR, PCO, PATO, GO, TO |
preferred Namespace Prefix | plant_ontology |
preferred Namespace Uri | http://purl.obolibrary.org/obo/ |
Release date | 2023-07-14T00:00:00+00:00 |
repository | https://github.com/Planteome/plant-ontology |
URI Lookup Endpoint | http://data.agroportal.lirmm.fr/search?ontologies=PO&require_exact_match=true&q= |
use Imports | http://purl.obolibrary.org/obo/po/imports/ncbitaxon_import.owl, http://purl.obolibrary.org/obo/po/imports/ro_import.owl |
used Ontology Engineering Tool | OWL API |
version | July 2023 |
Version IRI | http://purl.obolibrary.org/obo/po/releases/2023-07-13/po.owl |
No views of PO available
Classes | 2,025 |
Individuals | 9 |
Properties | 129 |
Maximum depth | 13 |
Maximum number of children | 65 |
Average number of children | 3 |
Classes with a single child | 132 |
Classes with more than 25 children | 4 |
Classes with no definition | 220 |
Agrisemantics Map of Data Standards
Collaborative Open Plant Omics
Computational Biology Institute
Maize Genetics and Genomics Database
Minimum Information About a Plant Phenotyping Experiment
Plant Genome and Systems Biology
RDA Wheat Interoperability Working Group