Plant Experimental Conditions Ontology

Last uploaded: November 12, 2020
Details
Acronym PECO
Visibility Public
Description A structured, controlled vocabulary which describes the treatments, growing conditions, and/or study types used in plant biology experiments.
Status Production
Format OWL
Contact Laurel Cooper , cooperl@science.oregonstate.edu
Pankaj Jaiswal, jaiswalp@science.oregonstate.edu
Categories Plant Anatomy and Development, Plant Science and Plant Products
Groups OBO Foundry, Rice Data Interoperability working group, Wheat Data Interoperability working group
Additional Metadata
URIhttp://purl.obolibrary.org/obo/peco.owl
bug Databasehttps://github.com/Planteome/plant-experimental-conditions-ontology/issues
From the same domain thanhttp://data.agroportal.lirmm.fr/ontologies/TO, http://data.agroportal.lirmm.fr/ontologies/PO
deprecatedfalse
endpoint
example Identifierhttp://purl.obolibrary.org/obo/EO_0007263
funded ByPlanteome (http://planteome.org/about)
has Formality Levelhttp://w3id.org/nkos/nkostype#ontology
has LicenseCreative Commons License
Ontology Syntaxhttp://www.w3.org/ns/formats/RDF_XML
has Prior Versionhttp://data.agroportal.lirmm.fr/ontologies/PECO/submissions/3
is Format Ofhttp://purl.obolibrary.org/obo/peco.obo
is Of Typehttp://omv.ontoware.org/2005/05/ontology#DomainOntology
keywordsplant experimental condition, treatments, growing conditions, plant biology experiments
Natural Language
ontology Related Tohttp://data.agroportal.lirmm.fr/ontologies/GO, http://bioportal.bioontology.org/ontologies/CHEBI, http://data.agroportal.lirmm.fr/ontologies/PATO, http://data.agroportal.lirmm.fr/ontologies/TO, http://data.agroportal.lirmm.fr/ontologies/PO, http://data.agroportal.lirmm.fr/ontologies/PR
preferred Namespace Prefixplant_experimental_conditions_ontology
Release date2020-11-12T18:06:19+01:00
repositoryhttps://github.com/Planteome/plant-experimental-conditions-ontology
sourcehttp://www.obofoundry.org/ontology/eo.html
URI Lookup Endpointhttp://data.agroportal.lirmm.fr/search?ontologies=PECO&require_exact_match=true&q=
use Importshttp://purl.obolibrary.org/obo/peco/patterns/exposure-chebi_role_pattern.owl, http://purl.obolibrary.org/obo/peco/imports/ncbitaxon_import.owl, http://purl.obolibrary.org/obo/peco/imports/envo_import.owl, http://purl.obolibrary.org/obo/peco/patterns/exposure-ncbitaxon_pattern.owl, http://purl.obolibrary.org/obo/peco/patterns/exposure-chebi_pattern.owl, http://purl.obolibrary.org/obo/peco/imports/ro_import.owl, http://purl.obolibrary.org/obo/peco/patterns/exposure-envo_pattern.owl, http://purl.obolibrary.org/obo/peco/imports/chebi_import.owl
versionV-2018
Version IRIhttp://purl.obolibrary.org/obo/peco/releases/2018-03-09/peco.owl
Submissions
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Links
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FAIR Scores beta
Total score : 321.0 ( 67.0% ) details
Metrics
Classes 3,121
Individuals 0
Properties 124
Maximum depth 30
Maximum number of children 209
Average number of children 2
Classes with a single child 785
Classes with more than 25 children 3
Classes with no definition 1,428
Visits
includedInDataCatalog
Projects using PECO

Agrisemantics Map of Data Standards

RDA Wheat Interoperability Working Group