Ontologies
FOBI
Food-Biomarker Ontology (FOBI)
OWL
No license
Last submission date May 3, 2022
Summary
Classes
Properties
Instances
Notes
Mappings
Widgets
SPARQL

General information

FOBI (Food-Biomarker Ontology) is an ontology composed of two interconnected sub-ontologies. One is a ”Food Ontology” consisting of raw foods and multi-component foods while the second is a ”Biomarker Ontology” containing food intake biomarkers classified by their chemical classes. These two sub-ontologies are conceptually independent but interconnected by different properties. This allows data and information regarding foods and food biomarkers to be visualized in a bidirectional way, going from metabolomics to nutritional data or vice versa. Potential applications of this ontology include the annotation of foods and biomarkers using a well-defined and consistent nomenclature, the standardized reporting of metabolomics workflows (e.g. metabolite identification, experimental design), or the application of different enrichment analysis approaches to analyze nutrimetabolomic data. See more...
Initial created on May 3, 2022. For additional information, contact Pol Castellano Escuder (polcaes@gmail.com).

Languages

Categories and subjects

Food
Nut
Svg Vector Icons : http://www.onlinewebfonts.com/icon
Export all metadata

Metrics

FAIR score
Beta

Total score : 280.0 ( 58.0%)
See details

Ontology relations network

Submissions

Identifiers

URI

http://purl.obolibrary.org/obo/fobi.owl
http://purl.obolibrary.org/obo/fobi.owl

AgroPortal URI

https://agroportal.lirmm.fr/ontologies/FOBI
https://agroportal.lirmm.fr/ontologies/FOBI

Dates

Creation date

May 3, 2022

Submission date

May 3, 2022

Modification date

April 9, 2020

Persons and organizations

Contact

Pol Castellano Escuder

Creator

Pol Castellano Escuder

Contributor

Raúl González-Domínguez
David S. Wishart
Cristina Andrés-Lacueva
Alex Sánchez-Pla

Other links

Projects and usage information

Projects using FOBI

No projects using FOBI

Methodology and provenance

Created with

http://protege.stanford.edu
http://protege.stanford.edu

Community

Repository

https://github.com/pcastellanoescuder/FoodBiomarkerOntology
https://github.com/pcastellanoescuder/FoodBiomarkerOntology

Bug database

https://github.com/pcastellanoescuder/FoodBiomarkerOntology/issues
https://github.com/pcastellanoescuder/FoodBiomarkerOntology/issues

Notes

Please cite FOBI project http://purl.obolibrary.org/obo/fobi where traditional citation is called for. However it is adequate that individual terms be attributed simply by use of the identifying PURL for the term, in projects that refer to them.

Groups

OBO Foundry

Content

Identifier pattern

http://purl.obolibrary.org/obo/FOBI_[0-9]{7}
http://purl.obolibrary.org/obo/FOBI_[0-9]{7}

Preferred namespace URI

http://purl.obolibrary.org/obo/FOBI_
http://purl.obolibrary.org/obo/FOBI_

Preferred namespace prefix

fobi

Example of resource

http://purl.obolibrary.org/obo/FOBI_040001
http://purl.obolibrary.org/obo/FOBI_040001

Visits

Views of FOBI

No views available for FOBI.