Food-Biomarker Ontology

Last uploaded: May 3, 2022
Details
Acronym FOBI
Visibility Public
Description FOBI (Food-Biomarker Ontology) is an ontology composed of two interconnected sub-ontologies. One is a ”Food Ontology” consisting of raw foods and multi-component foods while the second is a ”Biomarker Ontology” containing food intake biomarkers classified by their chemical classes. These two sub-ontologies are conceptually independent but interconnected by different properties. This allows data and information regarding foods and food biomarkers to be visualized in a bidirectional way, going from metabolomics to nutritional data or vice versa. Potential applications of this ontology include the annotation of foods and biomarkers using a well-defined and consistent nomenclature, the standardized reporting of metabolomics workflows (e.g. metabolite identification, experimental design), or the application of different enrichment analysis approaches to analyze nutrimetabolomic data.
Status Alpha
Format OWL
Contact Pol Castellano Escuder, polcaes@gmail.com
Categories Food and Human Nutrition
Groups OBO Foundry
Additional Metadata
URIhttp://purl.obolibrary.org/obo/fobi.owl
deprecatedfalse
endpoint
example Identifierhttp://purl.obolibrary.org/obo/FOODON_03307240
ContributorsRaúl González-Domínguez, David S. Wishart, Cristina Andrés-Lacueva, and Alex Sánchez-Pla
CreatorsPol Castellano Escuder (https://orcid.org/0000-0001-6466-877X)
Ontology Syntaxhttp://www.w3.org/ns/formats/OWL_XML
has Prior VersionFOBI/submissions/2
modification Date2020-04-09T00:00:00+00:00
Natural Language
notesPlease cite FOBI project http://purl.obolibrary.org/obo/fobi where traditional citation is called for. However it is adequate that individual terms be attributed simply by use of the identifying PURL for the term, in projects that refer to them.
ontology Related ToFOODON
preferred Namespace Prefixfobi
preferred Namespace Urihttp://purl.obolibrary.org/obo/
Release date2022-05-03T23:00:53+02:00
URI Lookup Endpointhttp://data.agroportal.lirmm.fr/search?ontologies=FOBI&require_exact_match=true&q=
used Ontology Engineering Toolhttp://protege.stanford.edu
version1.0.0
Submissions
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Total score : 275.0 ( 57.0% ) details
Metrics
Classes 1,334
Individuals 0
Properties 4
Maximum depth 8
Maximum number of children 74
Average number of children 3
Classes with a single child 140
Classes with more than 25 children 5
Classes with no definition 1,079
Visits
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