Biological Collections Ontology

Last uploaded: October 12, 2017
Details
Acronym BCO
Visibility Public
Description The goal of the BCO is to support the interoperability of biodiversity data, including data on museum collections, environmental/metagenomic samples, and ecological surveys. The BCO covers distinctions between individuals, organisms, voucher specimens, lots, samples, the relations between these entities, and the processes governing the creation and use of "samples". Also within scope are properties including collector, location, time, storage environment, containers, institution, and collection identifiers.
Status Production
Format OWL
Contact Ramona Walls, rwalls2008@gmail.com
Categories Biodiversity and Ecology, Taxonomic Classifications of Organisms
Groups GDR SemanDiv, OBO Foundry
Additional Metadata
URIhttp://purl.obolibrary.org/obo/bco.owl
bug Databasehttps://github.com/BiodiversityOntologies/bco/issues
deprecatedfalse
endorsed By
endpoint
example Identifierhttp://purl.obolibrary.org/obo/bco_0000036
funded ByNSF (http://www.nsf.gov/)
ContributorsJohn Wieczorek, Biocode Commons Ontology Hackathon members, Barry Smith, John Deck, Robert Guralnick
CreatorsRamona Walls (https://orcid.org/0000-0001-8815-0078)
has Formality Levelhttp://w3id.org/nkos/nkostype#ontology
has Licensehttps://creativecommons.org/publicdomain/zero/1.0/
Ontology Syntaxhttp://www.w3.org/ns/formats/RDF_XML
identifierhttp://purl.obolibrary.org/obo/bco.owl
keywordsBiodiversity, Ecology, Museum collections
known UsageThis ontology can be used to describe physical samples and sampling processes (for example, collection, extraction, and preservation techniques), as well as biodiversity observations that involve no physical sampling.
mailing Listlocal:bco-discuss@googlegroups.com
Metadata vocabulary usedlocal:local
Natural Language
notesThe Biological Collections Ontology was originally created at the Biocode Commons Hackathon at GSC14. Older versions can be viewed at http://code.google.com/p/biocode-commons/source/browse/#svn%2Ftrunk%2Fontologies%2Fbiocollections.
ontology Related Tohttp://data.agroportal.lirmm.fr/ontologies/ENVO, http://data.agroportal.lirmm.fr/ontologies/PCO
preferred Namespace Prefixbco
Release date2016-12-14T00:00:00+00:00
repositoryhttps://github.com/BiodiversityOntologies/bco
URI Lookup Endpointhttp://data.agroportal.lirmm.fr/search?ontologies=BCO&require_exact_match=true&q=
use Importslocal:local
used Ontology Engineering ToolOWL API
Version IRIhttp://purl.obolibrary.org/obo/bco/releases/2016-12-14/bco.owl
Submissions
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unknown (Parsed, Indexed, Metrics, Annotator) 12/14/2016 10/12/2017 OWL | CSV | RDF/XML
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Total score : 331.0 ( 69.0% ) details
Metrics
Classes 157
Individuals 28
Properties 209
Maximum depth 9
Maximum number of children 38
Average number of children 3
Classes with a single child 19
Classes with more than 25 children 1
Classes with no definition 24
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Projects using BCO

Agrisemantics Map of Data Standards