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Metrics

Number of classes:	6546
Number of individuals:	3
Number of properties:	74
Maximum depth:	36
Maximum number of children:	212
Average number of children:	3
Classes with a single child:	1205
Classes with more than 25 children:	47
Classes with no definition:	1816

Acronym	CL
Visibility	Public
Description	The Cell Ontology is a structured controlled vocabulary for cell types in animals.
Status	Production
Format	OWL
Contact	Alex Diehl, addiehl@buffalo.edu
Home Page	https://github.com/obophenotype/cell-ontology
Publications Page	http://dx.doi.org/doi:10.1093/database/bav010, http://dx.doi.org/doi:10.1186/s13059-014-0560-6
Documentation Page	https://zenodo.org/record/168254
Categories
Groups	Agronomic Linked Data, Consortium of Agricultural Biological Databases, OBO Foundry, Wheat Data Interoperability working group

URI	http://purl.obolibrary.org/obo/cl.owl
Natural Language
version	2016-11-23
Release date	2017-07-30T18:00:04+02:00
keywords	eukaryotes, cell biology, anatomy, molecular biology, chemical biology, molecular interactions, pathways and networks, proteins
known Usage	One of the main uses of the CL is to describe samples used in transcriptomic and functional genomics studies, such as FANTOM5, ENCODE and LINCS.
notes	See PMID:15693950, PMID:12799354, PMID:20123131, PMID:21208450; Contact Alexander Diehl, addiehl@buffalo.edu, University at Buffalo.
Creators	Chris Mungall, Nicole Vasilevsky, Melissa Haendel, Alan Ruttenberg, Jane Lomax, David Osumi-Sutherland
endorsed By	RDA WDI (http://ist.blogs.inra.fr/wdi)
has Domain	cells
has Formality Level	http://w3id.org/nkos/nkostype#ontology
has License
is Of Type	http://omv.ontoware.org/2005/05/ontology#DomainOntology
used Ontology Engineering Tool	OWL API
has Prior Version	CL/submissions/4
deprecated	false
Version IRI	http://purl.obolibrary.org/obo/cl/releases/2016-11-23/cl.owl
ontology Related To	local:local
identifier	http://doi.org/10.5281/zenodo.168254
is Format Of	http://purl.obolibrary.org/obo/cl.obo
endpoint
URI Lookup Endpoint	http://data.agroportal.lirmm.fr/search?ontologies=CL&require_exact_match=true&q=
repository	https://github.com/obophenotype/cell-ontology
bug Database	https://github.com/obophenotype/cell-ontology/issues
example Identifier	http://purl.obolibrary.org/obo/PR_000001889

Submission	Release Date	Upload Date	Downloads
2016-11-23 (Parsed, Indexed, Metrics, Annotator)	07/30/2017	07/30/2017	OWL \| CSV \| RDF/XML
2016-11-23 (Archived)	04/16/2017	04/16/2017	OWL
2016-11-23 (Archived)	01/30/2017	01/25/2017	OWL
unknown (Archived)	01/24/2017	01/24/2017	OWL
unknown (Archived)	01/24/2017	01/24/2017	OWL
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Project	Description	People	Institution
Agronomic Linked Data	AgroLD is a RDF knowledge base that consists of data integrated... AgroLD is a RDF knowledge base that consists of data integrated from a variety of plant resources and ontologies. The aim of the Agronomic Linked Data (AgroLD) project is to provide a portal for bioinformatics and domain experts to exploit the homogenized data models towards efficiently generating research hypotheses.	Pierre Larmande (pierre.larmande@ird.fr) Pierre Larmande (pierre.larmande@ird.fr)	IRD
VEST-AgroPortal Map of Standards	This VEST-AgroPortal provides a global map of existing... This VEST-AgroPortal provides a global map of existing vocabularies for the exchange of data in the field of food and agriculture. The directory is the result of the merging of records from two different sources: the VEST Registry (a registry of vocabularies of all types and all formats) and the AgroPortal (a repository of ontologies).	Valeria Pesce (valeria.pesce@fao.org) Valeria Pesce (valeria.pesce@fao.org)	Food & Agriculture Organization

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