Phenotype And Trait Ontology

Last uploaded: September 10, 2021
Details
Acronym PATO
Visibility Public
Description An ontology of phenotypic qualities (properties, attributes or characteristics).
Status Production
Format OWL
Contact George Gkoutos, geg18@aber.ac.uk
Categories Biodiversity and Ecology, Plant Phenotypes and Traits
Groups OBO Foundry, Rice Data Interoperability working group, Wheat Data Interoperability working group
Additional Metadata
URIhttp://purl.obolibrary.org/obo/pato.owl
Alternative namePhenotypic Quality Ontology
bug Databasehttps://github.com/pato-ontology/pato/issues
deprecatedfalse
endorsed ByRDA WDI (http://ist.blogs.inra.fr/wdi/)
endpoint
example Identifierhttp://purl.obolibrary.org/obo/PATO_0001464
has Domainhttp://data.agroportal.lirmm.fr/categories/TRAITS, http://data.bioontology.org/categories/BIODIV
has Formality Levelhttp://w3id.org/nkos/nkostype#ontology
has LicenseCreative Commons License
Ontology Syntaxhttp://www.w3.org/ns/formats/RDF_XML
has Prior VersionPATO/submissions/24
identifierhttp://purl.obolibrary.org/obo/pato.owl
is Format Ofhttp://purl.obolibrary.org/obo/pato.obo
is Of Typehttp://omv.ontoware.org/2005/05/ontology#DomainOntology
mailing Listlocal:obo-phenotype@lists.sourceforge.net
Metadata vocabulary usedlocal:local
Natural Language
ontology Related ToENVO, CL
preferred Namespace Prefixquality
Release date2021-09-10T18:07:34+02:00
repositoryhttps://github.com/pato-ontology/pato/
URI Lookup Endpointhttp://data.agroportal.lirmm.fr/search?ontologies=PATO
use Importslocal:local
used ByENVO, TOP, CL
used Ontology Engineering ToolOBO-Edit 2.3.1
version2021-09-09
Version IRIhttp://purl.obolibrary.org/obo/pato/releases/2016-09-15/pato.owl
Submissions
Version Released Uploaded Downloads
2021-09-09 (Parsed, Indexed, Metrics, Annotator) 09/10/2021 09/10/2021 OWL | CSV | RDF/XML
2021-08-06 (Archived) 08/06/2021 08/06/2021 OWL
2021-07-09 (Archived) 07/09/2021 07/09/2021 OWL
2021-06-15 (Archived) 06/17/2021 06/17/2021 OWL
2021-05-26 (Archived) 05/27/2021 05/27/2021 OWL
2021-04-16 (Archived) 04/16/2021 04/16/2021 OWL
2021-04-14 (Archived) 04/14/2021 04/14/2021 OWL
2016-09-15 (Archived) 08/02/2020 08/02/2020 OWL
2016-09-15 (Archived) 05/09/2020 05/09/2020 OWL
2016-09-15 (Archived) 05/08/2020 05/08/2020 OWL
2016-09-15 (Archived) 03/25/2020 03/25/2020 OWL
2016-09-15 (Archived) 02/13/2020 02/13/2020 OWL
2016-09-15 (Archived) 12/03/2019 12/03/2019 OWL
2016-09-15 (Archived) 11/06/2019 11/06/2019 OWL
2016-09-15 (Archived) 10/31/2019 10/31/2019 OWL
2016-09-15 (Archived) 09/05/2019 09/05/2019 OWL
2016-09-15 (Archived) 11/13/2018 11/13/2018 OWL
2016-09-15 (Archived) 08/15/2018 08/15/2018 OWL
2016-09-15 (Archived) 08/10/2018 08/10/2018 OWL
2016-09-15 (Archived) 03/28/2018 03/28/2018 OWL
2016-09-15 (Archived) 02/07/2018 02/07/2018 OWL
2016-09-15 (Archived) 07/10/2017 07/10/2017 OWL
2016-09-15 (Archived) 03/22/2017 03/22/2017 OWL
2016-09-15 (Archived) 03/13/2017 03/13/2017 OBO
2016-09-15 (Archived) 08/15/2014 06/23/2015 OBO
more...
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Metrics
Classes 5,614
Individuals 0
Properties 247
Maximum depth 20
Maximum number of children 313
Average number of children 3
Classes with a single child 700
Classes with more than 25 children 26
Classes with no definition 1,883
Visits
includedInDataCatalog
Projects using PATO

Agrisemantics Map of Data Standards

Agronomic Linked Data

Computational Biology Institute

Dictybase

Hardwood Genomics Project

Monarch Initiative

Planteome

RDA Wheat Interoperability Working Group

The Arabidopsis Information Resource