Sequence Types and Features Ontology - signal_peptide - Classes | IBC AgroPortal

Sequence Types and Features Ontology

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Preferred Name	signal_peptide
Synonyms	signal signal peptide coding sequence signal peptide INSDC_feature:sig_peptide
Definitions	Old def before biosapiens:The sequence for an N-terminal domain of a secreted protein; this domain is involved in attaching nascent polypeptide to the membrane leader sequence. The signal_peptide is a short region of the peptide located at the N-terminus that directs the protein to be secreted or part of membrane components.
ID	http://purl.obolibrary.org/obo/SO_0000418
comment	Old def before biosapiens:The sequence for an N-terminal domain of a secreted protein; this domain is involved in attaching nascent polypeptide to the membrane leader sequence.
database_cross_reference	http://en.wikipedia.org/wiki/Signal_peptide
definition	The signal_peptide is a short region of the peptide located at the N-terminus that directs the protein to be secreted or part of membrane components.
has_alternative_id	BS:00159
has_exact_synonym	signal peptide coding sequence signal peptide INSDC_feature:sig_peptide
has_obo_namespace	sequence
has_related_synonym	signal
id	SO:0000418
in_subset	http://purl.obolibrary.org/obo/so#biosapiens http://purl.obolibrary.org/obo/so#SOFA
label	signal_peptide
notation	SO:0000418
part_of	http://purl.obolibrary.org/obo/SO_0001062
prefLabel	signal_peptide
treeView	http://purl.obolibrary.org/obo/SO_0001062
subClassOf	http://purl.obolibrary.org/obo/SO_0001527

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Internal mappings

Delete	Mapping To	Ontology	Source	Relations
	http://purl.obolibrary.org/obo/SO_0000418	Protein Ontology	LOOM
	http://purl.obolibrary.org/obo/SO_0000418	Protein Ontology	SAME_URI
	http://purl.obolibrary.org/obo/SO_0000418	Cell Ontology	LOOM
	http://purl.obolibrary.org/obo/SO_0000418	Cell Ontology	SAME_URI
	http://purl.obolibrary.org/obo/PR_000021936	Protein Ontology	REST PR	http://www.geneontology.org/formats/oboinowl#hasdbxref

Interportal mappings

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	There are currently no interportal mappings for this class.

External mappings

Delete	Mapping To	Ontology	Source	Relations
	feature_type	http://purl.uniprot.org/uniprot/	REST SO	http://www.geneontology.org/formats/oboinowl#hasdbxref

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