Permanent link to this class
Sequence Types and Features Ontology
Last uploaded:
October 8, 2021
| Acronym | SO |
| Visibility | Public |
| Description | A structured controlled vocabulary for sequence annotation, for the exchange of annotation data and for the description of sequence objects in databases. |
| Status | Production |
| Format | OWL |
| Contact | Barry Moore (Software Developer), barry.moore@genetics.utah.edu Colin Batchelor (for RNA related questions), colin@tantallon.org.uk Karen Eilbeck (PI), karen.eilbeck@genetics.utah.edu |
| Categories | Plant Genetic Resources |
| Groups | OBO Foundry, Rice Data Interoperability working group, Wheat Data Interoperability working group |
| URI | http://purl.obolibrary.org/obo/so.owl |
| bug Database | https://github.com/The-Sequence-Ontology/SO-Ontologies/issues |
| deprecated | false |
| endorsed By | RDA WDI (http://ist.blogs.inra.fr/wdi/) |
| endpoint |  |
| example Identifier | http://purl.obolibrary.org/obo/SO_0001673 |
| has Domain | http://data.agroportal.lirmm.fr/categories/GENPLANT |
| has Formality Level | http://w3id.org/nkos/nkostype#ontology |
| has Prior Version | SO/submissions/89 |
| identifier | http://purl.obolibrary.org/obo/so.owl |
| is Format Of | http://purl.obolibrary.org/obo/so.obo |
| is Of Type | http://omv.ontoware.org/2005/05/ontology#DomainOntology |
| Natural Language | |
| notes | test |
| preferred Namespace Prefix | sequence |
| Release date | 2021-10-08T18:06:35+02:00 |
| repository | https://github.com/The-Sequence-Ontology/SO-Ontologies |
| URI Lookup Endpoint | http://data.agroportal.lirmm.fr/search?ontologies=SO |
| used Ontology Engineering Tool | OBO-Edit 2.3.1 |
| Version | Released | Uploaded | Downloads |
|---|---|---|---|
| unknown (Parsed, Indexed, Metrics, Annotator) | 10/08/2021 | 10/08/2021 | OWL | CSV | RDF/XML |
| unknown (Archived) | 10/06/2021 | 10/06/2021 | OWL |
| unknown (Archived) | 10/01/2021 | 10/01/2021 | OWL |
| unknown (Archived) | 07/13/2021 | 07/13/2021 | OWL |
| unknown (Archived) | 07/02/2021 | 07/02/2021 | OWL |
| unknown (Archived) | 06/11/2021 | 06/11/2021 | OWL |
| unknown (Archived) | 05/28/2021 | 05/28/2021 | OWL |
| unknown (Archived) | 04/28/2021 | 04/28/2021 | OWL |
| unknown (Archived) | 04/27/2021 | 04/27/2021 | OWL |
| unknown (Archived) | 04/25/2021 | 04/25/2021 | OWL |
| unknown (Archived) | 04/24/2021 | 04/24/2021 | OWL |
| unknown (Archived) | 04/22/2021 | 04/22/2021 | OWL |
| unknown (Archived) | 02/17/2021 | 02/17/2021 | OWL |
| unknown (Archived) | 02/12/2021 | 02/12/2021 | OWL |
| unknown (Archived) | 02/09/2021 | 02/09/2021 | OWL |
| unknown (Archived) | 02/04/2021 | 02/04/2021 | OWL |
| unknown (Archived) | 02/02/2021 | 02/02/2021 | OWL |
| unknown (Archived) | 01/27/2021 | 01/27/2021 | OWL |
| unknown (Archived) | 01/22/2021 | 01/22/2021 | OWL |
| unknown (Archived) | 12/31/2020 | 12/31/2020 | OWL |
| unknown (Archived) | 12/21/2020 | 12/21/2020 | OWL |
| unknown (Archived) | 11/12/2020 | 11/12/2020 | OWL |
| unknown (Archived) | 08/27/2020 | 08/27/2020 | OWL |
| unknown (Archived) | 08/21/2020 | 08/21/2020 | OWL |
| unknown (Archived) | 08/20/2020 | 08/20/2020 | OWL |
| unknown (Archived) | 08/14/2020 | 08/14/2020 | OWL |
| unknown (Archived) | 08/06/2020 | 08/06/2020 | OWL |
| unknown (Archived) | 07/09/2020 | 07/09/2020 | OWL |
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| unknown (Archived) | 05/08/2020 | 05/08/2020 | OWL |
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| unknown (Archived) | 10/31/2019 | 10/31/2019 | OWL |
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| unknown (Archived) | 09/14/2018 | 09/14/2018 | OWL |
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| unknown (Archived) | 12/16/2017 | 12/16/2017 | OWL |
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| unknown (Archived) | 04/28/2017 | 04/28/2017 | OWL |
| unknown (Archived) | 03/17/2017 | 03/17/2017 | OWL |
| unknown (Archived) | 12/16/2016 | 12/16/2016 | OWL |
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| unknown (Archived) | 10/31/2016 | 10/31/2016 | OWL |
| unknown (Archived) | 10/28/2016 | 10/28/2016 | OWL |
| unknown (Archived) | 10/26/2016 | 10/26/2016 | OWL |
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| unknown (Archived) | 05/30/2016 | 05/30/2016 | OWL |
| unknown (Archived) | 05/14/2015 | 06/23/2015 | OWL |
| more... | |||
No views of SO available
| Classes | 2,705 |
| Individuals | 0 |
| Properties | 50 |
| Maximum depth | 13 |
| Maximum number of children | 45 |
| Average number of children | 3 |
| Classes with a single child | 133 |
| Classes with more than 25 children | 7 |
| Classes with no definition | 204 |
