Sequence Types and Features Ontology (SO)
OWL
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Last submission date November 20, 2024
ID http://purl.obolibrary.org/obo/SO_0001720
http://purl.obolibrary.org/obo/SO_0001720
https://agroportal.lirmm.fr/ontologies/SO/SO_0001720
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Preferred name

epigenetically_modified_region

Synonyms
epigenetically modified region
Definitions
Moved from is_a biological_region (SO:0001411) to is_a regulatory_region (SO:0005836) on 11 Feb 2021. GREEKC members pointed out that this would be a more appropriate location. See GitHub Issue #530. 11 Feb 2021 updated definition along with addition of epigenomically_modified_region (SO:0002332). Epigenetically modified region is now not inherited while epigenomically modified region is not annotated as inherited. See GitHub Issue #532 and issue #534.
A biological DNA region implicated in epigenomic changes caused by mechanisms other than changes in the underlying DNA sequence. This includes, nucleosomal histone post-translational modifications, nucleosome depletion to render DNA accessible and post-replicational base modifications such as cytosine modification.
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