GFVO | Classes | AgroPortal

ID	http://www.biointerchange.org/gfvo#ReferenceSequence http://www.biointerchange.org/gfvo#ReferenceSequence https://agroportal.lirmm.fr/ontologies/GFVO/ReferenceSequence Loading
Preferred name	Reference Sequence
Definitions	Denotes the reference sequence of a feature. The reference sequence is of importance when dealing with genomic variation data, which is expressed by the "Variant" class. Encodes for the "Reference_seq" and "Sequence_context" attributes in GVF and the "REF" column in VCF.

rdfs:comment	Denotes the reference sequence of a feature. The reference sequence is of importance when dealing with genomic variation data, which is expressed by the "Variant" class. Encodes for the "Reference_seq" and "Sequence_context" attributes in GVF and the "REF" column in VCF.
rdf:type	http://www.w3.org/2002/07/owl#Class Loading
rdfs:subClassOf	http://www.biointerchange.org/gfvo#DNASequence Loading
rdfs:label	Reference Sequence
rdfs:isDefinedBy	http://samtools.github.io/hts-specs/VCFv4.2.pdf Loading http://sequenceontology.org/resources/gvf.html Loading http://www.1000genomes.org/wiki/Analysis/Variant%20Call%20Format/vcf-variant-call-format-version-41 Loading http://samtools.github.io/hts-specs/VCFv4.1.pdf Loading
rdfs:seeAlso	http://en.wikipedia.org/wiki/Reference_sequence Loading

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