EDAM bioinformatics operations, data types, formats, identifiers and topics - Gene expression - Classes | LIRMM AgroPortal

EDAM bioinformatics operations, data types, formats, identifiers and topics

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Preferred Name	Gene expression
Synonyms	Codon usage Gene transcription Transcription Gene expression profiling Gene translation DNA microarrays DNA chips Expression
Definitions	Gene expression levels are analysed by identifying, quantifying or comparing mRNA transcripts, for example using microarrays, RNA-seq, northern blots, gene-indexed expression profiles etc. This includes the study of codon usage in nucleotide sequence(s), genetic codes and so on.
ID	http://edamontology.org/topic_0203
comment	Gene expression levels are analysed by identifying, quantifying or comparing mRNA transcripts, for example using microarrays, RNA-seq, northern blots, gene-indexed expression profiles etc. This includes the study of codon usage in nucleotide sequence(s), genetic codes and so on.
Created in	beta12orEarlier
hasAlternativeId	http://edamontology.org/topic_0197
hasDefinition	The analysis of levels and patterns of synthesis of gene products (proteins and functional RNA) including interpretation in functional terms of gene expression data.
hasExactSynonym	Expression
hasHumanReadableId	Gene_expression
hasNarrowSynonym	Codon usage Gene transcription Transcription Gene expression profiling Gene translation DNA microarrays DNA chips
inSubset	http://purl.obolibrary.org/obo/edam#edam http://purl.obolibrary.org/obo/edam#events http://purl.obolibrary.org/obo/edam#topics
isdebtag	true
label	Gene expression
prefixIRI	topic_0203
prefLabel	Gene expression
seeAlso	http://purl.bioontology.org/ontology/MSH/D015870 https://en.wikipedia.org/wiki/Gene_expression
subClassOf	http://edamontology.org/topic_3321

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	http://purl.obolibrary.org/obo/GO_0010467	Cell Ontology	LOOM
	http://purl.obolibrary.org/obo/GO_0010467	Gene Ontology	LOOM
	http://purl.obolibrary.org/obo/GO_0010467	Gene Ontology	LOOM

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