<?xml version="1.0" encoding="UTF-8"?> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:obo_purl="http://purl.obolibrary.org/obo/" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:oboinowl_gen="http://www.geneontology.org/formats/oboInOwl#" xmlns:ns0="http://www.ebi.ac.uk/efo/" xmlns:metadata_def="http://data.bioontology.org/metadata/def/" xmlns:metadata="http://data.bioontology.org/metadata/"> <owl:Class rdf:about="http://purl.obolibrary.org/obo/OBI_0001442"> <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0000071"/> <rdfs:label>p-value</rdfs:label> <rdfs:label>q-value</rdfs:label> <obo_purl:IAO_0000115>A quantitative confidence value that measures the minimum false discovery rate that is incurred when calling that test significant.</obo_purl:IAO_0000115> <obo_purl:IAO_0000115 xml:lang="en">A quantitative confidence value that measures the minimum false discovery rate that is incurred when calling that test significant. To compute q-values, it is necessary to know the p-value produced by a test and possibly set a false discovery rate level.</obo_purl:IAO_0000115> <obo_purl:IAO_0000117 xml:lang="en">PERS:Philippe Rocca-Serra</obo_purl:IAO_0000117> <obo_purl:IAO_0000111>q-value</obo_purl:IAO_0000111> <obo_purl:IAO_0000112>PMID: 20483222. Comp Biochem Physiol Part D Genomics Proteomics. 2008 Sep;3(3):234-42. Analysis of Sus scrofa liver proteome and identification of proteins differentially expressed between genders, and conventional and genetically enhanced lines. "After controlling the false discovery rate (FDR&lt;/=0.1) using the Storey q value only four proteins (EPHX1, CAT, PAH, ST13) were shown to be differentially expressed between genders (Males/Females) and two proteins (SELENBP2, TAGLN) were differentially expressed between two lines (Transgenic/Conventional pigs)"</obo_purl:IAO_0000112> <obo_purl:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/> <obo_purl:IAO_0000118 xml:lang="en">FDR adjusted p-value</obo_purl:IAO_0000118> <obo_purl:IAO_0000119 xml:lang="en">Adapted from several sources, including http://.en/wikipedia.org/wiki/False_discovery_rate http://svitsrv25.epfl.ch/R-doc/library/qvalue.html</obo_purl:IAO_0000119> <oboinowl_gen:hasDbXref>NCIt:C44185</oboinowl_gen:hasDbXref> <ns0:definition_citation>Adapted from several sources, including http://.en/wikipedia.org/wiki/False_discovery_rate http://svitsrv25.epfl.ch/R-doc/library/qvalue.html</ns0:definition_citation> <metadata_def:prefLabel>p-value</metadata_def:prefLabel> <metadata_def:mappingLoom>pvalue</metadata_def:mappingLoom> <metadata_def:mappingSameURI rdf:resource="http://purl.obolibrary.org/obo/OBI_0001442"/> <metadata:prefixIRI>OBI:0001442</metadata:prefixIRI> </owl:Class> <rdf:Description rdf:about="http://purl.obolibrary.org/obo/OBI_0001442"> <metadata_def:mappingSameURI rdf:resource="http://purl.obolibrary.org/obo/OBI_0001442"/> </rdf:Description> </rdf:RDF>
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<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:obo_purl="http://purl.obolibrary.org/obo/" xmlns:owl="http://www.w3.org/2002/07/owl#" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" xmlns:oboinowl_gen="http://www.geneontology.org/formats/oboInOwl#" xmlns:ns0="http://www.ebi.ac.uk/efo/" xmlns:metadata_def="http://data.bioontology.org/metadata/def/" xmlns:metadata="http://data.bioontology.org/metadata/">
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    <rdfs:label>p-value</rdfs:label>
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    <obo_purl:IAO_0000115>A quantitative confidence value that measures the minimum false discovery rate that is incurred when calling that test significant.</obo_purl:IAO_0000115>
    <obo_purl:IAO_0000115 xml:lang="en">A quantitative confidence value that measures the minimum false discovery rate that is incurred when calling that test significant. 
To compute q-values, it is necessary to know the p-value produced by a test and possibly set a false discovery rate level.</obo_purl:IAO_0000115>
    <obo_purl:IAO_0000117 xml:lang="en">PERS:Philippe Rocca-Serra</obo_purl:IAO_0000117>
    <obo_purl:IAO_0000111>q-value</obo_purl:IAO_0000111>
    <obo_purl:IAO_0000112>PMID: 20483222. Comp Biochem Physiol Part D Genomics Proteomics. 2008 Sep;3(3):234-42. Analysis of Sus scrofa liver proteome and identification of proteins differentially expressed between genders, and conventional and genetically enhanced lines.
"After controlling the false discovery rate (FDR&lt;/=0.1) using the Storey q value only four proteins (EPHX1, CAT, PAH, ST13) were shown to be differentially expressed between genders (Males/Females) and two proteins (SELENBP2, TAGLN) were differentially expressed between two lines (Transgenic/Conventional pigs)"</obo_purl:IAO_0000112>
    <obo_purl:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
    <obo_purl:IAO_0000118 xml:lang="en">FDR adjusted p-value</obo_purl:IAO_0000118>
    <obo_purl:IAO_0000119 xml:lang="en">Adapted from several sources, including
http://.en/wikipedia.org/wiki/False_discovery_rate
http://svitsrv25.epfl.ch/R-doc/library/qvalue.html</obo_purl:IAO_0000119>
    <oboinowl_gen:hasDbXref>NCIt:C44185</oboinowl_gen:hasDbXref>
    <ns0:definition_citation>Adapted from several sources, including http://.en/wikipedia.org/wiki/False_discovery_rate http://svitsrv25.epfl.ch/R-doc/library/qvalue.html</ns0:definition_citation>
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