BioportalWebUi

URI*	http://purl.obolibrary.org/obo/vt.owl http://purl.obolibrary.org/obo/vt.owl
Abstract	Iowa State University, Mouse Genome Informatics, the Rat Genome Database, European Animal Disease Genomics Network of Excellence (EADGENE) and the French National Institute for Agricultural Research (INRA) have worked together to incorporate the Mammalian Phenotype (MP) ontology and the Animal Trait Ontology (ATO) to develop a Vertebrate Trait Ontology (VT), with emphasis on morphological, physiological and developmental traits in vertebrates. This project is aimed at enhancing the ability to standardize phenotype nomenclature across species. This will undoubtedly help the animal genome community by facilitating the transfer of genomics information from some well studied species. See more...
Accrual periodicity	http://purl.org/cld/freq/monthly See more...
Bug database	https://github.com/AnimalGenome/vertebrate-trait-ontology/issues https://github.com/AnimalGenome/vertebrate-trait-ontology/issues
Contact*	Jim Reecy (jreecy@iastate.edu) Cari Park (caripark@iastate.edu)
Object creation date property	http://purl.org/dc/elements/1.1/created http://purl.org/dc/elements/1.1/created
Submission date	February 12, 2025
Deprecated	false See more...
Description*	The Vertebrate Trait Ontology is a controlled vocabulary for the description of traits (measurable or observable characteristics) pertaining to the morphology, physiology, or development of vertebrate organisms. See more...
Documentation	https://github.com/AnimalGenome/vertebrate-trait-ontology https://github.com/AnimalGenome/vertebrate-trait-ontology
Example of use	https://www.animalgenome.org/QTLdb, https://www.animalgenome.org/CorrDB, http://rgd.mcw.edu/, http://isa-tools.org/, https://www.animalgenome.org/VCmap See more...
Example of resource	http://purl.obolibrary.org/obo/VT_1000047 See more...
Subject	https://data.agroportal.lirmm.fr/categories/ANIMAL See more...
Formality level	http://w3id.org/nkos/nkostype#ontology http://w3id.org/nkos/nkostype#ontology
License
Representation language*	OWL See more...
Syntax	http://www.w3.org/ns/formats/RDF_XML http://www.w3.org/ns/formats/RDF_XML
Prior version	http://agroportal.lirmm.fr/ontologies/VT/submissions/45 45
Homepage	https://www.animalgenome.org/bioinfo/projects/vt/ https://www.animalgenome.org/bioinfo/projects/vt/
Other identifier	https://doi.org/10.1186/2041-1480-4-13 https://doi.org/10.1186/2041-1480-4-13
Indexed or included in catalog or repository	http://aber-owl.net/ontology/VT http://aber-owl.net/ontology/VT http://bioportal.bioontology.org/ontologies/VT http://bioportal.bioontology.org/ontologies/VT http://www.ebi.ac.uk/ols/ontologies/vt http://www.ebi.ac.uk/ols/ontologies/vt http://www.obofoundry.org/ontology/vt.html http://www.obofoundry.org/ontology/vt.html http://www.ontobee.org/ontology/vt http://www.ontobee.org/ontology/vt https://agroportal.lirmm.fr/ agroportal.lirmm.fr https://biosharing.org/bsg-s002749 https://biosharing.org/bsg-s002749 https://lod-cloud.net/dataset/bioportal-vt https://lod-cloud.net/dataset/bioportal-vt
Has equivalences with	https://agroportal.lirmm.fr/ontologies/ATOL ATOL
Is format of	http://purl.obolibrary.org/obo/vt.obo http://purl.obolibrary.org/obo/vt.obo
Generic type	http://omv.ontoware.org/2005/05/ontology#DomainOntology http://omv.ontoware.org/2005/05/ontology#DomainOntology
Metadata vocabulary used	http://www.geneontology.org/formats/oboInOwl# http://www.geneontology.org/formats/oboInOwl#
Modification date	November 20, 2023
Object modification date property	http://purl.org/dc/elements/1.1/modified http://purl.org/dc/elements/1.1/modified
Natural language
Root of obsolete branch	http://www.geneontology.org/formats/oboInOwl#ObsoleteClass http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
Generally related to or relies on	https://agroportal.lirmm.fr/ontologies/LBO LBO https://agroportal.lirmm.fr/ontologies/LPT LPT
Preferred namespace prefix	Trait.ontology See more...
Preferred namespace URI	http://purl.obolibrary.org/obo/VT_ http://purl.obolibrary.org/obo/VT_
Access URL	http://purl.obolibrary.org/obo/VT.owl http://purl.obolibrary.org/obo/VT.owl
Creation date*	February 12, 2025
Repository	https://github.com/AnimalGenome/vertebrate-trait-ontology https://github.com/AnimalGenome/vertebrate-trait-ontology
Source	https://agroportal.lirmm.fr/ontologies/VT See more...
Status*	production See more...
URI Lookup Endpoint	http://agroportal.lirmm.fr/search?ontologies=VT&require_exact_match=true&q= search?ontologies=VT&require_exact_match=true&q=
Identifier pattern	http://purl.obolibrary.org/obo/VT_[0-9]{7} See more...
Created with	OBO-Edit 2.3.1 See more...
Version information	2025-02-11 See more...
Version IRI	http://purl.obolibrary.org/obo/vt/releases/2025-02-11/vt.owl http://purl.obolibrary.org/obo/vt/releases/2025-02-11/vt.owl

Scroll down to see more