BioportalWebUi

URI*	https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl
Bug database	https://bitbucket.org/PlantExpAssay/ontology/issues https://bitbucket.org/PlantExpAssay/ontology/issues
Contact*	Peao Team (peaoteam@gmail.com)
Submission date	June 30, 2020
Deprecated	false See more...
Description*	The Plant domain has been the subject of several attempts to structure and formally define terms and corresponding relations, such as their anatomical features, developmental stages, and the application of particular experimental procedures to a biological problem. However, a focus on experimental assays in order to describe the whole experimental procedure, to the best of our knowledge, has only been attempted in the context of a very general description based on classical views of the scientific method. In this study, we focus on the development and proposal of an ontology dedicated to the description of these experimental procedures, regardless of the scientific questions that prompted the assays. This ontology includes entities from three distinct realms (biological, physical and data), which include both experimental products, their relations and the protocols describing their manipulation. See more...
Documentation	https://bitbucket.org/PlantExpAssay/ontology https://bitbucket.org/PlantExpAssay/ontology
Example of resource	http://purl.obolibrary.org/obo/EO_0007263 See more...
Contributor	Cátia Vaz Nuno D. Mendes Pedro T. Monteiro Inês Chaves Daniel Faria
Representation language*	OWL See more...
Syntax	http://www.w3.org/ns/formats/OWL_XML http://www.w3.org/ns/formats/OWL_XML
Prior version	https://agroportal.lirmm.fr/ontologies/PEAO/submissions/1 1
Homepage	https://bitbucket.org/PlantExpAssay/ontology https://bitbucket.org/PlantExpAssay/ontology
Indexed or included in catalog or repository	https://agroportal.lirmm.fr/ agroportal.lirmm.fr https://bioportal.bioontology.org/ontologies/PEAO https://bioportal.bioontology.org/ontologies/PEAO http://aber-owl.net/ontology/PEAO http://aber-owl.net/ontology/PEAO
Known usage	The final outcome is a useful and comprehensive ontology in the plant domain, that will be useful for data integration and querying heterogeneous data. See more...
Modification date	August 2, 2019
Natural language
Notes	This ontology provide the means to efficiently gather information concerning plant experimental assays and elicit the extraction of relevant information. The representation of the data using this specifically designed for a Plant Experimental Assays (PEAO) enables the preservation of the semantic relationships between the entities represented therein, which facilitates the interpretation of the results and the integration of data produced by different experiments. Moreover, the workflow established in PEAO supports the management of all the gathered data and the disperse information. See more...
Root of obsolete branch	http://www.geneontology.org/formats/oboInOwl#ObsoleteClass http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
Preferred namespace prefix	peao See more...
Access URL	https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl
Creation date*	August 2, 2019
Repository	https://bitbucket.org/PlantExpAssay/ontology/src/ https://bitbucket.org/PlantExpAssay/ontology/src/
Status*	production See more...
URI Lookup Endpoint	http://agroportal.lirmm.fr/search?ontologies=PEAO&require_exact_match=true&q= search?ontologies=PEAO&require_exact_match=true&q=
Created with	OWL API See more...

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