BioportalWebUi

URI*	https://www.purl.org/decide/LiveStockHealthOnto/LHO https://www.purl.org/decide/LiveStockHealthOnto/LHO
Alternative name	LiveStockHealthOntology See more... LivetockHealthOnto See more... LHO See more... LiveStockHealthOnto See more... LivestockHealthOntology See more...
Knowledge representation paradigm	Domain Specific Modeling Paradigm See more...
Contact*	Miel Hostens (miel.hostens@ugent.be) Saba Noor (saba.noor@ugent.be)
Object creation date property	http://purl.org/dc/elements/1.1/created http://purl.org/dc/elements/1.1/created
Submission date	April 3, 2024
Deprecated	false See more...
Description*	The Livestock Health Ontology (LHO) contains information on the health and well-being of livestock animal species such as cattle, pigs, and poultry. Furthermore, it represents the explicit structured and standardized framework for specific domain knowledge and data integration of livestock species. During the development process, knowledge can be retrieved from domain experts, and after the retrieving process, the prototype is designed for reasoning and planning of data related to cattle, pigs, and poultry. Moreover, LHO contains information regarding farms Identifications, their samples, geolocation, breed, diagnostic tests, Pathogen identifications, and Pathogen results for specific bacteria such as Histophilus Somni (HS), Mannheimia Haemolytica (MH), Pasteurella Multocida (PM), Bovine Coronavirus (BCV) bacterial mycoplasma and aerobic culture results for the respiratory diseases in cattle. This information is represented as concepts of classes, subclasses, and their relationship in the form of object and data properties. For pigs, it includes farm type, age, weight, pig stages and pathogens like PRRS, SwineInfluenza, and M_Hyponemoniea. In poultry, LHO incorporates farm type, with specific pathogen names such as Infectious Bronchitis (IB), providing a concise overview of health aspects across livestock species. Incorporating pathogen identification results, whether positive or negative, within the Livestock Health Ontology (LHO), not only enhances data organization but also supports projects like DECIDE EU Horizon 2020. By providing a structured framework for analyzing disease emergence and options for diagnostic confirmation, LHO contributes to the development of robust data-driven decision-support tools in livestock health management. See more...
Documentation	https://bioportal.bioontology.org/ontologies/LHO https://bioportal.bioontology.org/ontologies/LHO
Example of use	https://decide-project-eu.github.io/case-studies-website/tutorials/ontologies.html See more... https://github.com/decide-project-eu/LivestockHealthOntology See more...
Subject	https://data.agroportal.lirmm.fr/categories/FISHERIES See more... https://data.agroportal.lirmm.fr/categories/GEO See more... https://data.agroportal.lirmm.fr/categories/HEALTH See more... https://data.agroportal.lirmm.fr/categories/FARMING See more... https://data.agroportal.lirmm.fr/categories/TRAITS See more... https://data.agroportal.lirmm.fr/categories/ANIMAL See more...
Formality level	http://w3id.org/nkos/nkostype#ontology http://w3id.org/nkos/nkostype#ontology
Representation language*	OWL See more...
Syntax	http://www.w3.org/ns/formats/RDF_XML http://www.w3.org/ns/formats/RDF_XML
Has part (has views)	https://agroportal.lirmm.fr/ontologies/DECIDE DECIDE
Indexed or included in catalog or repository	https://bioportal.bioontology.org https://bioportal.bioontology.org
Generic type	http://omv.ontoware.org/2005/05/ontology#DomainOntology http://omv.ontoware.org/2005/05/ontology#DomainOntology
Keywords	Livestock See more... Disease emergence See more... Veterinary ontology See more... Disease surveillance See more... Livestock health See more... Cattle health See more... Poultry health See more... Livestock diseases Pathogen identification See more... Diagnostic tests Farm management See more... Animal health ontology See more... Data-driven decision support Livestock management See more... Pathogen detection See more... Pig health See more...
Known usage	https://decide-project-eu.github.io/case-studies-website/case-studies/cattle-barometer.html See more...
Missingimports	http://www.purl.org/decide See more...
Modification date	May 6, 2024
Object modification date property	http://purl.org/dc/elements/1.1/modified http://purl.org/dc/elements/1.1/modified
Natural language
Notes	LHO, guided by OBO Foundry principles, integrates domain knowledge and data for livestock health. The ontology covers farms, samples, geolocation, breed, diagnostic tests, and pathogen identification, including bacteria like Histophilus somni, Mannheimia haemolytica, Pasteurella multocida, Bovine coronavirus, bacterial mycoplasma, and aerobic culture results in cattle. For pigs, it includes FarmType, age, weight, and pathogens like PRRS, SI and M_Hyponemoniea. In poultry, LHO incorporates FarmType, with specific pathogen names such as Infectious Bronchitis (IB), providing a concise overview of health aspects across livestock species. See more... https://www.purl.org/decide/LiveStockHealthOnto/LHO See more...
Root of obsolete branch	http://www.geneontology.org/formats/oboInOwl#ObsoleteClass http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
Preferred namespace prefix	LHO See more...
Preferred namespace URI	https://www.purl.org/decide/LiveStockHealthOnto/LHO# https://www.purl.org/decide/LiveStockHealthOnto/LHO#
Access URL	https://data.bioontology.org/ontologies/LHO/download?apikey=4a5011ea-75fa-4be6-8e89-f45c8c84844e https://data.bioontology.org/ontologies/LHO/download?apikey=4a5011ea-75fa-4be6-8e89-f45c8c84844e
Creation date*	April 3, 2024
Similar to	https://agroportal.lirmm.fr/ontologies/AGROVOC AGROVOC
Source	https://github.com/decide-project-eu/LivestockHealthOntology See more... https://zenodo.org/records/8261126 See more...
Status*	alpha See more...
URI Lookup Endpoint	https://agroportal.lirmm.fr/search?ontologies=LHO&require_exact_match=true&q= search?ontologies=LHO&require_exact_match=true&q=
Imports	https://bioportal.bioontology.org/ontologies/DECIDE https://bioportal.bioontology.org/ontologies/DECIDE
Engineering methodology	Hybrid Approach See more...
Created with	Protégé See more...
Version information	V1.1 See more...
Version IRI	https://www.purl.org/decide/LiveStockHealthOnto/LHO/1.2 https://www.purl.org/decide/LiveStockHealthOnto/LHO/1.2

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