URI*
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http://purl.obolibrary.org/obo/fobi.owl
http://purl.obolibrary.org/obo/fobi.owl
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Bug database
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https://github.com/pcastellanoescuder/FoodBiomarkerOntology/issues
https://github.com/pcastellanoescuder/FoodBiomarkerOntology/issues
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Contact*
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Pol Castellano Escuder (polcaes@gmail.com)
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Submission date
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May 3, 2022
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Deprecated
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false
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Description*
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FOBI (Food-Biomarker Ontology) is an ontology composed of two interconnected sub-ontologies. One is a ”Food Ontology” consisting of raw foods and multi-component foods while the second is a ”Biomarker Ontology” containing food intake biomarkers classified by their chemical classes. These two sub-ontologies are conceptually independent but interconnected by different properties. This allows data and information regarding foods and food biomarkers to be visualized in a bidirectional way, going from metabolomics to nutritional data or vice versa. Potential applications of this ontology include the annotation of foods and biomarkers using a well-defined and consistent nomenclature, the standardized reporting of metabolomics workflows (e.g. metabolite identification, experimental design), or the application of different enrichment analysis approaches to analyze nutrimetabolomic data.
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Documentation
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https://github.com/pcastellanoescuder/FoodBiomarkerOntology
https://github.com/pcastellanoescuder/FoodBiomarkerOntology
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Example of resource
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http://purl.obolibrary.org/obo/FOBI_040001
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Contributor
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Raúl González-Domínguez David S. Wishart Cristina Andrés-Lacueva Alex Sánchez-Pla |
Creator
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Pol Castellano Escuder |
Representation language*
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OWL
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Syntax
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http://www.w3.org/ns/formats/OWL_XML
http://www.w3.org/ns/formats/OWL_XML
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Prior version
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Homepage
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https://github.com/pcastellanoescuder/FoodBiomarkerOntology
https://github.com/pcastellanoescuder/FoodBiomarkerOntology
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Indexed or included in catalog or repository
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https://aber-owl.net
https://aber-owl.net
https://ontobee.org
https://ontobee.org
https://onki.fi
https://onki.fi
https://bioregistry.io/registry/fobi
https://bioregistry.io/registry/fobi
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Modification date
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April 9, 2020
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Natural language
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Notes
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Please cite FOBI project http://purl.obolibrary.org/obo/fobi where traditional citation is called for. However it is adequate that individual terms be attributed simply by use of the identifying PURL for the term, in projects that refer to them.
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Generally related to or relies on
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Preferred namespace prefix
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fobi
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Preferred namespace URI
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http://purl.obolibrary.org/obo/FOBI_
http://purl.obolibrary.org/obo/FOBI_
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Bibliographic reference
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https://doi.org/10.1093/bioinformatics/btab626
https://doi.org/10.1093/bioinformatics/btab626
https://doi.org/10.1093/databa/baaa033
https://doi.org/10.1093/databa/baaa033
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Access URL
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http://purl.obolibrary.org/obo/fobi.owl
http://purl.obolibrary.org/obo/fobi.owl
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Creation date*
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May 3, 2022
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Repository
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https://github.com/pcastellanoescuder/FoodBiomarkerOntology
https://github.com/pcastellanoescuder/FoodBiomarkerOntology
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Status*
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alpha
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URI Lookup Endpoint
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http://agroportal.lirmm.fr/search?ontologies=FOBI&require_exact_match=true&q=
search?ontologies=FOBI&require_exact_match=true&q=
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Identifier pattern
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http://purl.obolibrary.org/obo/FOBI_[0-9]{7}
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Created with
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http://protege.stanford.edu
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Version information
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1.0.0
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