BioportalWebUi

URI*	http://bioportal.bioontology.org/ontologies/FISHO http://bioportal.bioontology.org/ontologies/FISHO
Contact*	Mohd Najib (23.mohdnajib@gmail.com) Sarinder Kaur (sarinder@um.edu.my)
Object creation date property	http://purl.org/dc/elements/1.1/created http://purl.org/dc/elements/1.1/created
Submission date	September 10, 2024
Deprecated	false See more...
Description*	This Fish Ontology is an ontology created as how the author views the fish structure following the book "The Diversity of Fishes: Biology, Evolution and Ecology" as the main reference, which covers one part of view on ichthyology, with an emphasis on diversity and adaptation. This ontology is created with the mindset of categorizing fish automatically based on the attributes and terms mined from the fish specimen. Most of the basic organization from this ontology follows Nelson's research due to its synthetic and broad approach, while recognizing that Nelson's conclusions are one of many alternative interpretations of the literature, which is mostly agreed by our main references, and many fish and fisheries researchers. Most of the classification used in this ontology is in no means completed and just following the recent classification provided by the books For now our work focused more on two group of fish which is early jawless fish, and advanced jawed fishes. The classification from both of this group are structured following the reference. See more...
Documentation	https://zenodo.org/records/852711 https://zenodo.org/records/852711
Representation language*	OWL See more...
Indexed or included in catalog or repository	https://bioportal.bioontology.org https://bioportal.bioontology.org
Object modification date property	http://purl.org/dc/elements/1.1/modified http://purl.org/dc/elements/1.1/modified
Notes	This Fish Ontology is an ontology created as how the author views the fish structure following the book "The Diversity of Fishes: Biology, Evolution and Ecology" as the main reference, which covers one part of view on ichthyology, with an emphasis on diversity and adaptation. This ontology is created with the mindset of categorizing fish automatically based on the attributes and terms mined from the fish specimen. Most of the basic organization from this ontology follows Nelson's research due to its synthetic and broad approach, while recognizing that Nelson's conclusions are one of many alternative interpretations of the literature, which is mostly agreed by our main references, and many fish and fisheries researchers. Most of the classification used in this ontology is in no means completed and just following the recent classification provided by the books For now our work focused more on two group of fish which is early jawless fish, and advanced jawed fishes. The classification from both of this group are structured following the reference. See more... This Fish Ontology is an ontology created as how the author views the fish structure following the book "The Diversity of Fishes: Biology, Evolution and Ecology" as the main reference, which covers one part of view on ichthyology, with an emphasis on diversity and adaptation. This ontology is created with the mindset of categorizing fish automatically based on the attributes and terms mined from the fish specimen. Most of the basic organization from this ontology follows Nelson's research due to its synthetic and broad approach, while recognizing that Nelson's conclusions are one of many alternative interpretations of the literature, which is mostly agreed by our main references, and many fish and fisheries researchers. Most of the classification used in this ontology is in no means completed and just following the recent classification provided by the books For now our work focused more on two group of fish which is early jawless fish, and advanced jawed fishes. The classification from both of this group are structured following the reference. See more...
Root of obsolete branch	http://www.geneontology.org/formats/oboInOwl#ObsoleteClass http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
Bibliographic reference	https://doi.org/10.7717/peerj.3811 https://doi.org/10.7717/peerj.3811
Access URL	https://data.bioontology.org/ontologies/FISHO/download?apikey=4a5011ea-75fa-4be6-8e89-f45c8c84844e https://data.bioontology.org/ontologies/FISHO/download?apikey=4a5011ea-75fa-4be6-8e89-f45c8c84844e
Creation date*	September 10, 2024
Repository	https://github.com/mohdnajib1985/FOWebPage/tree/v1.0.2 https://github.com/mohdnajib1985/FOWebPage/tree/v1.0.2
Status*	beta See more...
URI Lookup Endpoint	https://agroportal.lirmm.fr/search?ontologies=FISHO&require_exact_match=true&q= search?ontologies=FISHO&require_exact_match=true&q=
Version information	Version 1.0.2 - This version are capable of classifying Jawless Fish, Early Jawed Fish and living fossil fish in the current version. Furthermore there are several classifications which are still ongoing such as Bony Fishes, Advanced Jawed Fish, Shark, Skates, and Rays. See more...
Version IRI	http://bioportal.bioontology.org/ontologies/FISHO/version/1.0.2 http://bioportal.bioontology.org/ontologies/FISHO/version/1.0.2

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