URI*
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http://www.ebi.ac.uk/efo/efo.owl
http://www.ebi.ac.uk/efo/efo.owl
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Bug database
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https://github.com/EBISPOT/efo/issues
https://github.com/EBISPOT/efo/issues
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Contact*
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Efo User List (efo-users@lists.sourceforge.net)
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Rights holder
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EMBL(https://ror.org/02catss52) (http://www.ebi.ac.uk/) |
Object creation date property
|
http://purl.org/dc/elements/1.1/created
http://purl.org/dc/elements/1.1/created
|
Submission date
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November 18, 2024
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Deprecated
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false
See more...
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Description*
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The Experimental Factor Ontology (EFO) provides a systematic description of many experimental variables available in EBI databases, and for projects such as the GWAS catalog. It combines parts of several biological ontologies, such as UBERON anatomy, ChEBI chemical compounds, and Cell Ontology. EFO is developed by the EMBL-EBI Samples, Phenotypes and Ontologies Team (SPOT). We also add terms for external users when requested.
See more...
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Documentation
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http://www.ebi.ac.uk/efo
http://www.ebi.ac.uk/efo
|
Endorsed by
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RDA WDI |
Example of resource
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http://www.orpha.net/ORDO/Orphanet_1390
See more...
|
Contributor
|
Catherine Leroy James Malone Simon Jupp Eleanor Williams Ele Holloway Emma Kate Hastings Elen Parkinson Dani Welter Natalja Kurbatova Drashtti Vasant Jon Ison Sirarat Sarntivijai Tomasz Adamusiak |
Creator
|
Drashtti Vasant Catherine Leroy Gautier Koscielny Laura Huerta Martinez James Malone Natalja Kurbatova Simon Jupp Zoe May Pendlington Paola Roncaglia Helen Parkinson Ele Holloway Dani Welter Zoe May Pendlington Sirarat Sarntivijai Olamidipupo Ajigboye Eleanor Williams Trish Whetzel Emma Kate Hastings Tomasz Adamusiak Paola Roncaglia Jon Ison Gautier Koscielny Trish Whetzel Laura Huerta Martinez |
Formality level
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http://w3id.org/nkos/nkostype#ontology
http://w3id.org/nkos/nkostype#ontology
|
License
|
|
Representation language*
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OWL
See more...
|
Syntax
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http://www.w3.org/ns/formats/RDF_XML
http://www.w3.org/ns/formats/RDF_XML
|
Prior version
|
|
Homepage
|
http://www.ebi.ac.uk/efo/
http://www.ebi.ac.uk/efo/
|
Other identifier
|
https://doi.org/10.1093/bioinformatics/btq099
https://doi.org/10.1093/bioinformatics/btq099
|
Indexed or included in catalog or repository
|
https://agroportal.lirmm.fr/
agroportal.lirmm.fr
https://bioportal.bioontology.org/ontologies/EFO
https://bioportal.bioontology.org/ontologies/EFO
http://aber-owl.net/ontology/EFO
http://aber-owl.net/ontology/EFO
http://www.ontobee.org/ontology/EFO
http://www.ontobee.org/ontology/EFO
https://lod-cloud.net/dataset/bioportal-efo
https://lod-cloud.net/dataset/bioportal-efo
https://biosharing.org/bsg-s000082
https://biosharing.org/bsg-s000082
https://vest.agrisemantics.org/content/experimental-factor-ontology
https://vest.agrisemantics.org/content/experimental-factor-ontology
http://www.ebi.ac.uk/ols/ontologies/efo
http://www.ebi.ac.uk/ols/ontologies/efo
|
Generic type
|
http://omv.ontoware.org/2005/05/ontology#UpperLevelOntology
http://omv.ontoware.org/2005/05/ontology#UpperLevelOntology
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Known usage
|
The scope of EFO is to support the annotation, analysis and visualization of data handled by many groups at the EBI and as the core ontology for Open Targets.
See more...
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Logo
|
https://www.ebi.ac.uk/efo/images/EFO_mast_frontier.gif
https://www.ebi.ac.uk/efo/images/EFO_mast_frontier.gif
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Modification date
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February 15, 2022
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Object modification date property
|
http://purl.org/dc/elements/1.1/modified
http://purl.org/dc/elements/1.1/modified
|
More permissions
|
Copyright [2014] EMBL - European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.
See more...
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Natural language
|
|
Notes
|
2024-11-18
See more...
2024-08-15
See more...
2024-07-04
See more...
2024-06-17
See more...
2024-10-15
See more...
2024-05-15
See more...
2024-07-15
See more...
|
Root of obsolete branch
|
http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
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Preferred namespace prefix
|
efo
See more...
|
Publisher
|
http://www.ebi.ac.uk/ |
Access URL
|
https://github.com/EBISPOT/efo/releases/download/current/efo.owl
https://github.com/EBISPOT/efo/releases/download/current/efo.owl
|
Creation date*
|
November 18, 2024
|
Repository
|
https://github.com/EBISPOT/efo
https://github.com/EBISPOT/efo
|
Status*
|
production
See more...
|
URI Lookup Endpoint
|
http://agroportal.lirmm.fr/search?ontologies=EFO&require_exact_match=true&q=
search?ontologies=EFO&require_exact_match=true&q=
|
Use guidelines
|
https://www.ebi.ac.uk/about/terms-of-use
See more...
|
Created with
|
OWL API
See more...
|
Version information
|
3.72.0
See more...
|
Version IRI
|
http://www.ebi.ac.uk/efo/releases/v3.72.0/efo.owl
http://www.ebi.ac.uk/efo/releases/v3.72.0/efo.owl
|
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