BioportalWebUi

URI*	http://purl.obolibrary.org/obo/cdao.owl http://purl.obolibrary.org/obo/cdao.owl
Bug database	https://sourceforge.net/p/cdao/bugs/ https://sourceforge.net/p/cdao/bugs/
Contact*	Jim Balhoff (balhoff@nescent.org)
Object creation date property	http://purl.org/dc/elements/1.1/created http://purl.org/dc/elements/1.1/created
Submission date	January 25, 2024
Deprecated	false See more...
Description*	The Comparative Data Analysis Ontology (CDAO) provides a framework for understanding data in the context of evolutionary-comparative analysis. This comparative approach is used commonly in bioinformatics and other areas of biology to draw inferences from a comparison of differently evolved versions of something, such as differently evolved versions of a protein. In this kind of analysis, the things-to-be-compared typically are classes called 'OTUs' (Operational Taxonomic Units). The OTUs can represent biological species, but also may be drawn from higher or lower in a biological hierarchy, anywhere from molecules to communities. The features to be compared among OTUs are rendered in an entity-attribute-value model sometimes referred to as the 'character-state data model'. For a given character, such as 'beak length', each OTU has a state, such as 'short' or 'long'. The differences between states are understood to emerge by a historical process of evolutionary transitions in state, represented by a model (or rules) of transitions along with a phylogenetic tree. CDAO provides the framework for representing OTUs, trees, transformations, and characters. The representation of characters and transformations may depend on imported ontologies for a specific type of character. See more...
Documentation	https://sourceforge.net/projects/cdao/ https://sourceforge.net/projects/cdao/
Example of resource	http://purl.obolibrary.org/obo/CDAO_0000098 See more...
Contributor	Chris Stoeckert Lawrence Hunter Yongqun (Oliver) He William Hogan Matt Brush Carlo Torniai Christian A. Boelling James Malone Sivaram Arabandi Pat Hayes Jennifer Fostel Ron Rudnicki Philippe Rocca-Serra Satya Sahoo Holger Stenzhorn Paolo Ciccarese William Duncan David Osumi-Sutherland Larisa Soldatova Melanie Courtot Michel Dumontier Darren Natale Jie Zheng Christopher Mungall Jonathan Rees Adam Goldstein Bjoern Peters Randall Dipert James A. Overton Werner Ceusters Albert Goldfain Gwen Frishkoff Barry Smith Mathias Brochhausen Alan Ruttenberg
Creator	CDAO Team
Subject	comparative analysis; comparative data analysis; evolutionary comparative analysis; evolution; phylogeny; phylogenetics See more...
Formality level	http://w3id.org/nkos/nkostype#ontology http://w3id.org/nkos/nkostype#ontology
License	http://creativecommons.org/publicdomain/zero/1.0/
Representation language*	OWL See more...
Syntax	http://www.w3.org/ns/formats/RDF_XML http://www.w3.org/ns/formats/RDF_XML
Prior version	https://agroportal.lirmm.fr/ontologies/CDAO/submissions/3 3
Homepage	http://www.evolutionaryontology.org/ http://www.evolutionaryontology.org/
Indexed or included in catalog or repository	https://lod-cloud.net/dataset/bioportal-cdao https://lod-cloud.net/dataset/bioportal-cdao https://agroportal.lirmm.fr/ agroportal.lirmm.fr http://www.obofoundry.org/ontology/cdao.html http://www.obofoundry.org/ontology/cdao.html http://aber-owl.net/ontology/CDAO http://aber-owl.net/ontology/CDAO https://biosharing.org/bsg-s002618 https://biosharing.org/bsg-s002618 http://www.ebi.ac.uk/ols/ontologies/cdao http://www.ebi.ac.uk/ols/ontologies/cdao http://www.ontobee.org/ontology/CDAO http://www.ontobee.org/ontology/CDAO https://bioportal.bioontology.org/ontologies/CDAO https://bioportal.bioontology.org/ontologies/CDAO https://vest.agrisemantics.org/content/comparative-data-analysis-ontology https://vest.agrisemantics.org/content/comparative-data-analysis-ontology
Generic type	http://omv.ontoware.org/2005/05/ontology#DomainOntology http://omv.ontoware.org/2005/05/ontology#DomainOntology
Keywords	comparative analysis, comparative data analysis, evolutionary comparative analysis, evolution, phylogeny, phylogenetics See more...
Mailing list	https://lists.sourceforge.net/lists/listinfo/cdao-discuss See more...
Object modification date property	http://purl.org/dc/elements/1.1/modified http://purl.org/dc/elements/1.1/modified
Natural language
Notes	Comparison of two or more biological entities of the same class when the similarities and differences of the entities are treated explicitly as the product of an evolutionary process of descent with modification. See more...
Root of obsolete branch	http://www.geneontology.org/formats/oboInOwl#ObsoleteClass http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
Preferred namespace prefix	cdao See more...
Preferred namespace URI	http://purl.obolibrary.org/obo/CDAO_ http://purl.obolibrary.org/obo/CDAO_
Bibliographic reference	http://www.evolutionaryontology.org http://www.evolutionaryontology.org
Access URL	http://purl.obolibrary.org/obo/cdao.owl http://purl.obolibrary.org/obo/cdao.owl
Creation date*	January 25, 2024
Repository	https://sourceforge.net/projects/cdao/ https://sourceforge.net/projects/cdao/
Status*	production See more...
URI Lookup Endpoint	http://agroportal.lirmm.fr/search?ontologies=CDAO&require_exact_match=true&q= search?ontologies=CDAO&require_exact_match=true&q=
Identifier pattern	http://purl.obolibrary.org/obo/CDAO_[0-9]{7} See more...
Imports	http://purl.obolibrary.org/obo/iao/ontology-metadata.owl http://purl.obolibrary.org/obo/iao/ontology-metadata.owl
Created with	OWL API See more...
Version information	2013-02-01 See more...
Version IRI	http://purl.obolibrary.org/obo/cdao/2024-01-25/cdao.owl http://purl.obolibrary.org/obo/cdao/2024-01-25/cdao.owl

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