BioportalWebUi

URI*	https://opendata.inrae.fr/bag-def https://opendata.inrae.fr/bag-def
Abstract	The French ANR project "Data to Knowledge in Agronomy and Biodiversity" D2KAB (www.d2kab.org) has created a framework to turn agronomy and biodiversity data into knowledge –semantically described, interoperable, actionable, open– and investigate scientific methods and tools to exploit this knowledge for applications in science & agriculture. One of the five driving scenarii of D2KAB was to publish on the Web of Linked data an archive of French agricultural alert bulletins, called Plant Health Bulletins (Bulletins de Santé du Végétal). To annotate the bulletins using crop diseases and pests, we need a new semantic resource. Several ontologies and knowledge graphs already exist on the subject, but they do not cover all our needs. We have therefore developed a new ontology, "BioAGgressor Ontology" (BAGO), reusing elements from existing ontologies as far as possible. This new ontology was developed using the LOT methodology in partnership with 4 experts in agriculture, entomology and plant disease. See more...
Bug database	https://forgemia.inra.fr/bsv/bio-agressor-ontology/ https://forgemia.inra.fr/bsv/bio-agressor-ontology/
Contact*	Catherine Roussey (catherine.roussey@inrae.fr)
Coverage	France See more...
Object creation date property	http://purl.org/dc/elements/1.1/created http://purl.org/dc/elements/1.1/created
Submission date	May 28, 2025
Depiction	https://github.com/agroportal/project-management/blob/ed95660c10bdafbfd23970e071ef6a3d25e69996/images/BAGO_1.png?raw=true https://github.com/agroportal/project-management/blob/ed95660c10bdafbfd23970e071ef6a3d25e69996/images/BAGO_1.png?raw=true https://github.com/agroportal/project-management/blob/ed95660c10bdafbfd23970e071ef6a3d25e69996/images/BAGO_2.png?raw=true https://github.com/agroportal/project-management/blob/ed95660c10bdafbfd23970e071ef6a3d25e69996/images/BAGO_2.png?raw=true
Deprecated	false See more...
Description*	This ontology and related knowledge graph was build during the D2KAB project. The goal is to model all the living organisms involved in cultivated plant disease appearance. The ontology and its documentation represent the point of view of some french researchers from differents intstitutions., This ontology and related knowledge graph was build during the D2KAB project. The goal is to model all the living organisms involved in cultivated plant disease appearance. The ontology and its documentation represent the point of view of some french researchers from differents institutions., This ontology and associated knowledge graphs were build during the D2KAB project. The ontology goal is to model all the living organisms involved in cultivated plant disease appearance. The ontology and its documentation represent the point of view of some french researchers from differents institutions (INRAE, Elzeard, Acta, IFV). See more...
Funded or sponsored by	D2KAB ANR Project ANR-18-CE23-0017 (www.d2kab.org)
Contributor	https://orcid.org/0000-0002-2711-7714 https://orcid.org/0000-0002-1641-5871 https://orcid.org/0000-0003-2487-1743 Marine COURTIN, MaIAGE, INRAE (https://orcid.org/0000-0003-4189-4322) Robert BOSSY, MaIAGE, INRAE (https://orcid.org/0000-0001-6652-9319) Philippe LARIGNON, IFV Florence AMARDEILH, Elzeard (https://orcid.org/0000-0002-6306-4437) Nicolas SAUVION, PHIM, INRAE (https://orcid.org/0000-0002-1641-5871) Philippe Larignon Florence Amardeilh Sophie Aubin Robert Bossy Matthieu Hirschy Stephan Bernard Marine Courtin Nicolas Sauvion https://orcid.org/0000-0002-6306-4437 https://orcid.org/0000-0001-9694-1443 https://orcid.org/0000-0003-4189-4322 https://orcid.org/0000-0003-4805-8220 Matthieu HIRSCHY, ACTA (https://orcid.org/0000-0002-2711-7714) https://orcid.org/0000-0001-6652-9319 Stephan BERNARD, LISC, INRAE (https://orcid.org/0000-0001-9694-1443) Sophie AUBIN, DIPSO, INRAE (https://orcid.org/0000-0003-4805-8220)
Creator	Catherine Roussey https://orcid.org/0000-0002-3076-5499
Formality level	http://w3id.org/nkos/nkostype#ontology http://w3id.org/nkos/nkostype#ontology
License
Representation language*	OWL See more...
Syntax	http://www.w3.org/ns/formats/OWL_XML http://www.w3.org/ns/formats/OWL_XML
Has part (has views)	https://agroportal.lirmm.fr/ontologies/BAG-GV BAG-GV
Other identifier	https://doi.org/10.57745/QOQFPN https://doi.org/10.57745/QOQFPN
Generic type	http://omv.ontoware.org/2005/05/ontology#DomainOntology http://omv.ontoware.org/2005/05/ontology#DomainOntology
Modification date	May 27, 2025
Object modification date property	http://purl.org/dc/elements/1.1/modified http://purl.org/dc/elements/1.1/modified
Natural language
Root of obsolete branch	http://www.geneontology.org/formats/oboInOwl#ObsoleteClass http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
Preferred namespace prefix	bago See more...
Preferred namespace URI	https://opendata.inrae.fr/bag-def# https://opendata.inrae.fr/bag-def#
Bibliographic reference	https://hal.science/hal-04638343 https://hal.science/hal-04638343
Publisher	INRAE https://inrae.fr/ MISTEA INRAE
Access URL	https://forgemia.inra.fr/bsv/bio-agressor-ontology/-/raw/master/bago_onto_latest.owl https://forgemia.inra.fr/bsv/bio-agressor-ontology/-/raw/master/bago_onto_latest.owl
Creation date*	July 8, 2024
Repository	https://forgemia.inra.fr/bsv/bio-agressor-ontology https://forgemia.inra.fr/bsv/bio-agressor-ontology
Source	IFV web page called "fiches pratiques" of the IFV Occitanie Center https://www.vignevin-occitanie.com/fiches-pratiques/ See more... https://doi.org/10.17180/9z65-4m22 See more... https://doi.org/10.4000/books.irdeditions.22185 See more... web site wikipedia https://fr.wikipedia.org/ See more... book Christian Lannou, Dominique Roby, Virginie Ravigné, Mourad Hannachi, Benoît Moury. L'immunité des plantes, Pour des cultures résistantes aux maladies, édition Quae, 7 janvier 2021, 392 pages, EAN13 eBook [ePub] : 9782759232352, https://www.quae.com/produit/1661/9782759232345/l-immunite-des-plantes See more... INRAE web site ephytia: https://ephytia.inra.fr/fr/ See more... book Phil Taylor. Plantwise Diagnostic Field Guide: A tool to diagnose crop problems and make recommendations for their management, www.plantwise.org, CABI, 2015, 118 pages, https://www.plantwise.org/wp-content/uploads/sites/4/2019/11/Diagnostic-Field-Guide.pdf See more... the INRAE thesaurus https://thesaurus.inrae.fr/thesaurus-inrae/fr/ See more... book Xavier Fauvergue, Adrien Rusch, Matthieu Barret, Marc Bardin, Emmanuelle Jacquin-Joly, Thibaut Malausa, Christian Lannou (coordination scientifique). Biocontrole, Edition Quae, 27 février 2020, 376 pages, EAN13 eBook [PDF] : 9782759230778, https://www.quae.com/produit/1605/9782759230778/biocontrole See more... web dictionary CNRTL https://www.cnrtl.fr/definition/ See more... web dictionary franceterme https://www.culture.fr/franceterme/ See more... book Nicolas Sauvion, Paul-André Calatayud, Denis Thiéry, Frédéric Marion-Poll (coordination scientifique). Interactions insectes-plantes, Editions QUAE et IRD, 19/08/2013, 752 pages. See more... web dictionary Larousse https://www.larousse.fr/dictionnaires/francais/ See more... book Jean-Michel Legave (coordination scientifique). Les productions fruitières à l'heure du changement climatique, Risques et opportunités en régions tempérées, édition Quae, 10 février 2022, 464 pages, EAN13 eBook [ePub] : 9782759232536, https://www.quae.com/produit/1667/9782759232529/les-productions-fruitieres-a-l-heure-du-changement-climatique See more... the web dictionary Camille Joseph, Daniel Delattre, Jean-Pierre Sarthou, 2018. Auxiliaires des cultures : Définition. Dictionnaire d’agroécologie. https://doi.org/10.17180/9z65-4m22 See more...
Status*	beta See more...
URI Lookup Endpoint	https://agroportal.lirmm.fr/search?ontologies=BAGO&require_exact_match=true&q= search?ontologies=BAGO&require_exact_match=true&q=
Identifier pattern	https://opendata.inrae.fr/bag-def#.+ See more...
Imports	http://www.w3.org/2004/02/skos/core http://www.w3.org/2004/02/skos/core
Version information	1.1 See more...
Version IRI	https://opendata.inrae.fr/bag-def/1.1 https://opendata.inrae.fr/bag-def/1.1

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