EFO | Classes | AgroPortal

ID	http://www.ebi.ac.uk/efo/EFO_0030063 http://www.ebi.ac.uk/efo/EFO_0030063 https://agroportal.lirmm.fr/ontologies/EFO/EFO_0030063 Loading
Preferred name	copy number assessment
Synonyms	copy number variation analysis genomic copy number assessment
Definitions	Assessment of the copy number of a genomic feature or region, referenced to the expected allele count in a given sample. Examples of an expected count would be: a) autosomal chromosome in human germline: 2; b) X-chromosome in human male: 1; c) triploid cancer cell line: 3, i.e. a region with 2 alleles in a triploid cell line would correspond to a low-level copy number loss. Result of genomic copy number assessment of a genomic element or region.

rdfs:comment	Assessment of the copy number of a genomic feature or region, referenced to the expected allele count in a given sample. Examples of an expected count would be: a) autosomal chromosome in human germline: 2; b) X-chromosome in human male: 1; c) triploid cancer cell line: 3, i.e. a region with 2 alleles in a triploid cell line would correspond to a low-level copy number loss.
rdf:type	http://www.w3.org/2002/07/owl#Class Loading
rdfs:subClassOf	http://purl.obolibrary.org/obo/IAO_0000030 Loading
rdfs:label	copy number assessment
obo_purl:IAO_0000115	Result of genomic copy number assessment of a genomic element or region.
oboinowl_gen:hasExactSynonym	copy number variation analysis genomic copy number assessment
dc:creator	paola
dc:date	2022-01-14T11:04:56Z

Subject	Author	Type	Created
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