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EFO
Experimental Factor Ontology
(EFO)
OWL
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Last submission date April 15, 2025
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ID
http://purl.obolibrary.org/obo/CHEBI_28368
http://purl.obolibrary.org/obo/CHEBI_28368
https://agroportal.lirmm.fr/ontologies/EFO/CHEBI_28368
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Preferred name
novobiocin
Synonyms
Novobiocin
N-{7-[(3-O-carbamoyl-6-deoxy-5-methyl-4-O-methyl-beta-D-gulopyranosyl)oxy]-4-hydroxy-8-methyl-2-oxo-2H-chromen-3-yl}-4-hydroxy-3-(3-methylbut-2-en-1-yl)benzamide
novobiocina
novobiocine
novobiocinum
Definitions
A coumarin-derived antibiotic obtained from Streptomyces niveus.
Raw data
rdf:type
http://www.w3.org/2002/07/owl#Class
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rdfs:subClassOf
http://purl.obolibrary.org/obo/CHEBI_33853
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http://purl.obolibrary.org/obo/CHEBI_24532
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http://purl.obolibrary.org/obo/CHEBI_37622
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rdfs:label
novobiocin
skos:notation
CHEBI:28368
obo_purl:IAO_0000115
A coumarin-derived antibiotic obtained from Streptomyces niveus.
oboinowl_gen:hasExactSynonym
Novobiocin
oboinowl_gen:hasDbXref
CAS:303-81-1
DrugBank:DB01051
Drug_Central:1974
HMDB:HMDB0015185
KEGG:C05080
KNApSAcK:C00002487
LINCS:LSM-5910
NCIt:C705
PDBeChem:NOV
PMID:17132020
PMID:18418407
PMID:19282394
PMID:19762445
PMID:20325309
PMID:21388139
PMID:22897434
PMID:26844397
PMID:26926630
PMID:27829510
PMID:27914946
PMID:28246042
PMID:28316592
PMID:9687383
Patent:WO2012049521
Patent:WO2012103487
Reaxys:1445842
SNOMEDCT:90220005
MESH:D009675
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oboinowl_gen:hasOBONamespace
chebi_ontology
oboinowl_gen:id
CHEBI:28368
oboinowl_gen:inSubset
http://purl.obolibrary.org/obo/chebi#3_STAR
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has_role
http://purl.obolibrary.org/obo/CHEBI_33281
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oboinowl_gen:hasRelatedSynonym
N-{7-[(3-O-carbamoyl-6-deoxy-5-methyl-4-O-methyl-beta-D-gulopyranosyl)oxy]-4-hydroxy-8-methyl-2-oxo-2H-chromen-3-yl}-4-hydroxy-3-(3-methylbut-2-en-1-yl)benzamide
novobiocina
novobiocine
novobiocinum
oboinowl_gen:hasAlternativeId
CHEBI:25597
CHEBI:44505
CHEBI:7644
obo_purl:charge
0
obo_purl:formula
C31H36N2O11
obo_purl:inchi
InChI=1S/C31H36N2O11/c1-14(2)7-8-16-13-17(9-11-19(16)34)27(37)33-21-22(35)18-10-12-20(15(3)24(18)42-28(21)38)41-29-23(36)25(43-30(32)39)26(40-6)31(4,5)44-29/h7,9-13,23,25-26,29,34-36H,8H2,1-6H3,(H2,32,39)(H,33,37)/t23-,25+,26-,29-/m1/s1
obo_purl:inchikey
YJQPYGGHQPGBLI-KGSXXDOSSA-N
obo_purl:mass
612.62430
obo_purl:monoisotopicmass
612.23191
obo_purl:smiles
CO[C@@H]1[C@@H](OC(N)=O)[C@@H](O)[C@H](Oc2ccc3c(O)c(NC(=O)c4ccc(O)c(CC=C(C)C)c4)c(=O)oc3c2C)OC1(C)C
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